prot_L-elsbetiae_contig7995.16968.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7995.16968.1
Unique Nameprot_L-elsbetiae_contig7995.16968.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length56
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7995.16968.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.500e-6
Identity = 22/28 (78.57%), Postives = 26/28 (92.86%), Query Frame = 0 
Query:    1 PAAATFFNAVQLLRDCMFNGSALPDHVV 28
            PAA +FF+A+QLLRDCMFNGS LPDH+V
Sbjct: 2284 PAAGSFFSALQLLRDCMFNGSTLPDHIV 2311
[Close]
BLAST of mRNA_L-elsbetiae_contig7995.16968.1 vs. uniprot
Match: A0A6H5K6P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P6_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 4.590e-5
Identity = 21/28 (75.00%), Postives = 26/28 (92.86%), Query Frame = 0 
Query:    1 PAAATFFNAVQLLRDCMFNGSALPDHVV 28
            PAA +FF+A+QLLRD MF+GSALPDH+V
Sbjct:  152 PAAGSFFSALQLLRDSMFDGSALPDHIV 179
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7995.16968.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KIB1_9PHAE1.500e-678.57ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K6P6_9PHAE4.590e-575.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7995contigL-elsbetiae_contig7995:8031..8354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7995.16968.1mRNA_L-elsbetiae_contig7995.16968.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7995 8031..8354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7995.16968.1 ID=prot_L-elsbetiae_contig7995.16968.1|Name=mRNA_L-elsbetiae_contig7995.16968.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=56bp
PAAATFFNAVQLLRDCMFNGSALPDHVVSAARQARQQVLAPASLPGTGSA
MGDPAC
back to top