prot_L-elsbetiae_contig7994.16963.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7994.16963.1
Unique Nameprot_L-elsbetiae_contig7994.16963.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length205
Homology
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BLAST of mRNA_L-elsbetiae_contig7994.16963.1 vs. uniprot
Match: A0A6H5K4V2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4V2_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 4.190e-60
Identity = 129/210 (61.43%), Postives = 153/210 (72.86%), Query Frame = 0 
Query:    1 MRGEETLNVVDAAGKSKKHDRAQPAATAGDKQEAAGLRQIEGVVHNLSELRKRSRKAAKDPDVPSPAPAVGEETLARNSSTES-----GGMKAEG---DWDASRLDEDKLARKIGSSKAARMLGLTEDQVRQAVVEAKEELRQSHSA-SGGSIERDSSDDGIRLSGLLSLAMILAGLGALWAYLSAYPHGTLSRFLIGIFPREMETLGLA 201
            MRGEET+ V       KK D+A       D+Q+ AGL+QI+GVV NLS+LR+R R      + PS A A GEE+L  N++TES     G  + E    +WDA RLDEDKLARKIGSSKAARMLGLTEDQVRQAV +AK+EL QS S  +GGS  RDS+DDG+  SG LSLAM+L G+ ALWA+LSAYPHGTL RFL+G+FPREMETLGLA
Sbjct:   67 MRGEETVGVA------KKLDQAGSVGAV-DEQKPAGLQQIQGVVDNLSQLRRRKRAK----NTPSSA-AAGEESLV-NTTTESQIKETGNAEDEAGRAEWDARRLDEDKLARKIGSSKAARMLGLTEDQVRQAVADAKQELEQSSSGPAGGSPARDSNDDGVGFSGFLSLAMLLVGMWALWAHLSAYPHGTLCRFLVGVFPREMETLGLA 263
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7994.16963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K4V2_9PHAE4.190e-6061.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 176..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..154
NoneNo IPR availableTMHMMTMhelixcoord: 155..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7994contigL-elsbetiae_contig7994:913..2665 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7994.16963.1mRNA_L-elsbetiae_contig7994.16963.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7994 226..3744 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7994.16963.1 ID=prot_L-elsbetiae_contig7994.16963.1|Name=mRNA_L-elsbetiae_contig7994.16963.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=205bp
MRGEETLNVVDAAGKSKKHDRAQPAATAGDKQEAAGLRQIEGVVHNLSEL
RKRSRKAAKDPDVPSPAPAVGEETLARNSSTESGGMKAEGDWDASRLDED
KLARKIGSSKAARMLGLTEDQVRQAVVEAKEELRQSHSASGGSIERDSSD
DGIRLSGLLSLAMILAGLGALWAYLSAYPHGTLSRFLIGIFPREMETLGL
ASYS*
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