prot_L-elsbetiae_contig799.16960.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig799.16960.1
Unique Nameprot_L-elsbetiae_contig799.16960.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length618
Homology
BLAST of mRNA_L-elsbetiae_contig799.16960.1 vs. uniprot
Match: D7G3M8_ECTSI (Similar to metal response element-binding transcription factor-1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3M8_ECTSI)

HSP 1 Score: 476 bits (1224), Expect = 5.880e-159
Identity = 289/468 (61.75%), Postives = 312/468 (66.67%), Query Frame = 0
Query:   51 GVSGRGGGGGEHECLVCGKVFGKACKLVRHAATHTGEKPFLCDEVGXXXXXXXXXXXXXXXXXXXXXXAGLSVSVGDAARQEAEARQRAALFEANAAAAGVSLEPPAE-----PSPYLPYAATTAKVPLVVASRMEREXXXXXXXXXXXXXXGGWKHSCPSCGRNFLDNYHLRRHIKAIHEGPRPYKCDHPVVL-------AAVAATPTPTAFSGAAAEVXXXXXXXXSAGVVSGAEVGQREGVTAEVAQANAAAAAVEAGKERGSAGVAXXXXXXXXXXXXXXXXXXXGAAFAKKWQLREHLHAEHGQTKFNSRQHRCPRPGCGREFDRPSKLAAHEKTHEARFVCQFSGCGAAFVLASGLNLHLKEEHPFRCGVCDKMFDREDTMQIHQGTHGRAGDGDFIRPYPCNVPGCGKSFTEKRNLNAHRRTRHTEGGRKRFRCEVGDCAMAFAHRHTLVKHVKREHQGSS 506
            G S  GG    +ECL+CGK F KACKL RHAATHTGEKPF+C E GXXXXXXXXXXXXXXXXXXX   AGLS SVGDAAR+EAE RQRAA F A AAAAGVSLE P       P   LP   TT   PL+ ASR+ERE              G WK +C +CGRNFLDNYHL+RHIKAIHE PRPY CDHPVV+       AA  A  T  AF+ A               VV+ A    +EG   +V++A  +   VEA       G                     GA+FAKKWQLREHL AEHGQ+KFNSRQHRC   GCGR FDRPSKLAAHEKTH+ARFVCQF GCGAAFVLASGLNLHLKE+HPFRCGVCDK+FDRED MQIHQ TH RAGDGDFIRPY CNV GCGK+FTEKRNLNAHRRT HTEGGRKRFR                VKHVKREHQ SS
Sbjct:   66 GSSWGGGSVAGYECLICGKSFSKACKLARHAATHTGEKPFVCSEAGXXXXXXXXXXXXXXXXXXXRRKAGLSTSVGDAARREAETRQRAAAFVAEAAAAGVSLEEPGAGGIGAPRRVLPLMKTTT-APLLEASRLERERAVNGSGSGGGGAQG-WKFTCGNCGRNFLDNYHLQRHIKAIHEAPRPYTCDHPVVVPPPTAPSAASVADGTAAAFATAFPGGSRARCERQGEEVVAEARGEAKEGK--DVSRAKGSVGGVEA-----EGGATERGLQQQPQQKQQRVLGVCGASFAKKWQLREHLFAEHGQSKFNSRQHRCSHAGCGRSFDRPSKLAAHEKTHKARFVCQFDGCGAAFVLASGLNLHLKEKHPFRCGVCDKVFDREDKMQIHQATHARAGDGDFIRPYHCNVRGCGKAFTEKRNLNAHRRTAHTEGGRKRFRXXXXXXXXXXXXXXXXVKHVKREHQSSS 524          
BLAST of mRNA_L-elsbetiae_contig799.16960.1 vs. uniprot
Match: E4V010_ARTGP (Zinc finger protein 613 n=1 Tax=Arthroderma gypseum (strain ATCC MYA-4604 / CBS 118893) TaxID=535722 RepID=E4V010_ARTGP)

HSP 1 Score: 73.6 bits (179), Expect = 5.500e-10
Identity = 64/208 (30.77%), Postives = 84/208 (40.38%), Query Frame = 0
Query:  328 GAAFAKKWQLREHLHAEH-GQTKFNSRQHRCPRPGCGREFDRPSKLAAHE-KTH-EARFVC----------QFSGCGAAFVLASG--LNLHLKEEHPFRCGVCDKMFDREDTMQIHQG-THGRAGDGDFIRPYPCNVPGCGKSFTEKRNLNAHRRTRHTEGGRKRFRCEVGD---------------CAMAFAHRHTLVKHVKREHQG 504
            G +F K   L +H+   H GQ  F  +        C   FD    L AHE + H EARF C          +  G G  +  A+   L  H++  HP  C  C         ++ H   +HG     D  R YPC  PGC +SFT+K NLN H +T H   G KRF C   D               C   +  +  L +HV+  H G
Sbjct:  181 GESFRKHSTLLKHVMTVHLGQRPFPCQVILDSGKACTAAFDTAGHLKAHESRVHGEARFTCTECIGNTEFEEGMGDGKQYNFATYALLQSHMRSVHPPTCPSCAHTCSSAKELRRHMEISHGTVSVEDR-RTYPCQHPGCDRSFTKKGNLNVHVKTVHE--GEKRFACGETDLSTSKKVGGWNGMDACGKRYGSKLALEEHVRTAHMG 385          
BLAST of mRNA_L-elsbetiae_contig799.16960.1 vs. uniprot
Match: C5FTJ4_ARTOC (Zinc finger protein 354C n=1 Tax=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) TaxID=554155 RepID=C5FTJ4_ARTOC)

HSP 1 Score: 71.2 bits (173), Expect = 2.880e-9
Identity = 49/141 (34.75%), Postives = 64/141 (45.39%), Query Frame = 0
Query:  362 CGREFDRPSKLAAHEK-TH-EARFVC------------QFSGCGAAFVLASGLNLHLKEEHPFRCGVCDKMFDREDTMQIH-QGTHGRAGDGDFIRPYPCNVPGCGKSFTEKRNLNAHRRTRHTEGGRKRFRCEVGDCAMA 487
            C   FD    L AHE+  H EARF C            +  G    F   + L  H++  HP  C  C  +      ++ H + +HG     D  R YPC  PGCG+SFT+K NLN H +T H   G KRF C   D + +
Sbjct:  213 CTAAFDTAGHLKAHERRVHGEARFTCTECIGNNEGEGKERDGNAFNFATYALLQSHMRSVHPPTCPTCAHICSSAKDLRRHIEISHGTVSVDDR-RAYPCQHPGCGRSFTKKGNLNVHVKTVHE--GEKRFACGETDLSTS 350          
BLAST of mRNA_L-elsbetiae_contig799.16960.1 vs. uniprot
Match: A0A3A3A2W7_9EURO (Transcription factor n=1 Tax=Aspergillus sclerotialis TaxID=2070753 RepID=A0A3A3A2W7_9EURO)

HSP 1 Score: 62.0 bits (149), Expect = 2.290e-6
Identity = 47/148 (31.76%), Postives = 62/148 (41.89%), Query Frame = 0
Query:  362 CGREFDRPSKLAAHE-KTH-EARFVC-------------------QFSGCGAAFVLASGLNLHLKEEHPFRCGVCDKMFDREDTMQIH-QGTHGRAGDGDFIRPYPCNVPGCGKSFTEKRNLNAHRRTRHTEGGRKRFRCEVGDCAMA 487
            C   FD    L +HE + H E RF C                     +    AF   + L  H+K  HP  C  C         ++ H +  HG     +  + +PC VPGCG+SFT+K NLN H RT H   G KRF C   D + +
Sbjct:  213 CRMAFDTAGHLRSHEARIHTEKRFSCTECSQRLQEQQASATYSNNSTNPTEVAFPTYALLQAHIKSAHPPHCPNCPMTCSSNRELRRHLEVAHGNVSLEER-KIFPCTVPGCGRSFTKKGNLNVHVRTVHD--GEKRFVCGETDLSTS 357          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig799.16960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G3M8_ECTSI5.880e-15961.75Similar to metal response element-binding transcri... [more]
E4V010_ARTGP5.500e-1030.77Zinc finger protein 613 n=1 Tax=Arthroderma gypseu... [more]
C5FTJ4_ARTOC2.880e-934.75Zinc finger protein 354C n=1 Tax=Arthroderma otae ... [more]
A0A3A3A2W7_9EURO2.290e-631.76Transcription factor n=1 Tax=Aspergillus sclerotia... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 383..408
e-value: 0.04
score: 23.1
coord: 202..225
e-value: 0.036
score: 23.2
coord: 355..379
e-value: 0.0067
score: 25.6
coord: 90..114
e-value: 0.015
score: 24.5
coord: 477..502
e-value: 0.0095
score: 25.1
coord: 62..84
e-value: 0.079
score: 22.1
coord: 444..469
e-value: 1.9E-4
score: 30.8
coord: 326..345
e-value: 110.0
score: 3.9
coord: 410..432
e-value: 0.016
score: 24.4
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 444..469
e-value: 4.8E-5
score: 23.6
coord: 355..379
e-value: 9.6E-4
score: 19.5
coord: 410..432
e-value: 0.0058
score: 17.0
coord: 92..114
e-value: 0.014
score: 15.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 92..114
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 412..432
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 357..379
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 479..502
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 446..469
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 64..84
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 204..225
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 202..230
score: 14.17
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 444..470
score: 12.3
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 477..507
score: 11.115
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 383..408
score: 9.141
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 355..379
score: 10.596
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 410..432
score: 9.743
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 90..119
score: 11.365
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 62..89
score: 14.482
NoneNo IPR availableGENE3D3.30.160.60coord: 442..470
e-value: 2.5E-10
score: 42.0
NoneNo IPR availableGENE3D3.30.160.60coord: 380..439
e-value: 1.3E-7
score: 33.6
NoneNo IPR availableGENE3D3.30.160.60coord: 91..121
e-value: 9.3E-9
score: 36.9
NoneNo IPR availableGENE3D3.30.160.60coord: 198..237
e-value: 5.3E-8
score: 34.6
NoneNo IPR availableGENE3D3.30.160.60coord: 471..522
e-value: 1.2E-6
score: 30.1
NoneNo IPR availableGENE3D3.30.160.60coord: 318..379
e-value: 6.5E-7
score: 31.3
NoneNo IPR availableGENE3D3.30.160.60coord: 61..90
e-value: 3.9E-9
score: 38.2
NoneNo IPR availablePANTHERPTHR23226ZINC FINGER PROTEINcoord: 202..432
coord: 62..234
coord: 327..507
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 406..464
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 379..419
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 62..114
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 344..380
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 201..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig799contigL-elsbetiae_contig799:12856..18581 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig799.16960.1mRNA_L-elsbetiae_contig799.16960.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig799 12711..19251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig799.16960.1 ID=prot_L-elsbetiae_contig799.16960.1|Name=mRNA_L-elsbetiae_contig799.16960.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=618bp
MVAAAPTPPAPAKTELGRLPPNSGSSGGASEEPQSQRQQKKKAAGAPLRA
GVSGRGGGGGEHECLVCGKVFGKACKLVRHAATHTGEKPFLCDEVGCSKA
FATKDKLKRHALSHARRKAGLSVSVGDAARQEAEARQRAALFEANAAAAG
VSLEPPAEPSPYLPYAATTAKVPLVVASRMERERAAAGGGGSGTGTGGGW
KHSCPSCGRNFLDNYHLRRHIKAIHEGPRPYKCDHPVVLAAVAATPTPTA
FSGAAAEVAVAAAVAASAGVVSGAEVGQREGVTAEVAQANAAAAAVEAGK
ERGSAGVARAAAAVGGLGKARKAHGVCGAAFAKKWQLREHLHAEHGQTKF
NSRQHRCPRPGCGREFDRPSKLAAHEKTHEARFVCQFSGCGAAFVLASGL
NLHLKEEHPFRCGVCDKMFDREDTMQIHQGTHGRAGDGDFIRPYPCNVPG
CGKSFTEKRNLNAHRRTRHTEGGRKRFRCEVGDCAMAFAHRHTLVKHVKR
EHQGSSSSSSSPSGENSHAESANAPRKGKHSKDKRQGTAETSSGASHRRH
ESHTAAAPAAAAGTGTVGGRVPVEAERDADETVESPKERPVEHFTGQCDE
ISVDPSPVGCASPAAEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf