prot_L-elsbetiae_contig7988.16959.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7988.16959.1
Unique Nameprot_L-elsbetiae_contig7988.16959.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length417
Homology
BLAST of mRNA_L-elsbetiae_contig7988.16959.1 vs. uniprot
Match: A0A6H5KBU9_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU9_9PHAE)

HSP 1 Score: 366 bits (940), Expect = 9.680e-113
Identity = 294/423 (69.50%), Postives = 325/423 (76.83%), Query Frame = 0
Query:    1 QALGKLIRTIGSTLDSTNNRTYMKELFRLMDKIANNKTINSRMKFMIRDLEELRKHSWVPRRKQDKAKTLDDIRKEAEAEARGGGAPPGRXXXXXXXXXXXXXXXX--PQDVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAEQPSETLVNKINGFVNEYISEKDKKEALLSFDELPKGPIPETVCDKIVSGVFEGKAAERPARVELLRVLAREKKLPQAALERALSPIIEFLTDIAVDAPKAETHFGVCLGVLISEKALQFPFVTENCQKHCPKIIPKIFTALL----TVRSPPLAREILETQNFGLPQLFPQKADAVEYLGANKLWILQPGLWVSSIVEPRLA 417
            +ALGKLIRTIGSTLD++ N  YM E+FRLMDKIANNK+INSRM+FMIRDLEELRKH+WVPRRKQDKAKTLDDIRKEAEAEARGGG PPGR   XXXXXX         PQDVR    XXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                       E+PSE LVNKINGFVNE++SEKDK EALLSFDELP GPIPETV   I+  V EGK AERPAR++LLR+LA ++KLPQ ALER L P+IEF+TDIAVD+P A+   GVCL VLISEKAL FPFVT+  +KHCP  + KIFTALL    +  S    RE LE+Q F LP+LFPQKADAV YL A +LW + PGLWV+SI+EP+LA
Sbjct:  637 EALGKLIRTIGSTLDTSKNTLYMTEIFRLMDKIANNKSINSRMRFMIRDLEELRKHNWVPRRKQDKAKTLDDIRKEAEAEARGGG-PPGRGGSXXXXXXSDFRGGQGGPQDVRAARRXXXXXXXXXXPIDGFQHQRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPSAAPTSLASPAQ-------VEEPSEKLVNKINGFVNEFVSEKDKDEALLSFDELPAGPIPETVSKIIIEKVLEGKPAERPARLDLLRLLASKQKLPQDALERTLDPMIEFITDIAVDSPNADKRLGVCLAVLISEKALVFPFVTQTVRKHCPGALTKIFTALLKEMLSTESALGVRETLESQKFSLPELFPQKADAVNYLEAEQLWAVHPGLWVTSILEPKLA 1051          
BLAST of mRNA_L-elsbetiae_contig7988.16959.1 vs. uniprot
Match: D7G664_ECTSI (Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G664_ECTSI)

HSP 1 Score: 278 bits (712), Expect = 2.560e-84
Identity = 181/417 (43.41%), Postives = 209/417 (50.12%), Query Frame = 0
Query:    1 QALGKLIRTIGSTLDSTNNRTYMKELFRLMDKIANNKTINSRMKFMIRDLEELRKHSWVPRRKQDKAKTLDDIRKEAEAEARGGGAPPGRXXXXXXXXXXXXXXXXPQDVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAEQPSETLVNKINGFVNEYISEKDKKEALLSFDELPKGPIPETVCDKIVSGVFEGKAAERPARVELLRVLAREKKLPQAALERALSPIIEFLTDIAVDAPKAETHFGVCLGVLISEKALQFPFVTENCQKHCPKIIPKIFTALLTVRSPPLAREILETQNFGLPQLFPQKADAVEYLGANKLWILQPGLWVSSIVEPRLA 417
            +ALGKLIRTIGSTLD++ N  YMKE+FRLMDKIANNK+INSRM+FMIRDLEELRKH+WVPRRKQDKAKTLDDIRKEAEAEARGGG PPG                     +                                                                                                           E+PSE LVNKINGFVNE++SEKDK EALLSFDELP GPIPETV   I+  V EGK AERPAR++LLR+LA ++KLPQ ALER L P+IEF+TDIAVD+P A+                                                       Q F LP+LFPQKADAV+YL A +LW + PGLWV+SI+EP+LA
Sbjct:   81 EALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKSINSRMRFMIRDLEELRKHNWVPRRKQDKAKTLDDIRKEAEAEARGGG-PPGP--------------------KREGLLPSRLASQALCCLCFRCVPPLISHHHPLLRPFFVFTLVRLWGLRVIETGGGAPRAAEAPMTLGAGRGDRKTLEQREGRSREGAAAAARLTEGRLRPTTPGLKVEEPSEKLVNKINGFVNEFVSEKDKDEALLSFDELPAGPIPETVSKIIIEKVLEGKPAERPARLDLLRLLASKQKLPQDALERTLDPMIEFITDIAVDSPNADN------------------------------------------------------QKFSLPELFPQKADAVKYLEAEQLWAVHPGLWVTSILEPKLA 422          
BLAST of mRNA_L-elsbetiae_contig7988.16959.1 vs. uniprot
Match: A0A7S2PHU1_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PHU1_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.040e-12
Identity = 113/355 (31.83%), Postives = 163/355 (45.92%), Query Frame = 0
Query:    1 QALGKLIRTIGSTLDSTNNRTYMKELFRLMDKIANNKTINSRMKFMIRDLEELRKHSWVPRRKQDKAKTLDDIRKEAEAEARGGGAPPGRXXXXXXXXXXXXXXXXPQDVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAEQPSETLVNKINGFVNEYISEKDKKEALLSFDELP-KGPIPETVCDKIVSGVFEGKAAERPARVELLRVLAREKKLPQAALERALSPIIEFLTDIAVDAPKAETHFGVCLGVLISEKALQFPFVTENCQKHCPKIIP 354
            +AL +L  TIG T+DS+ +R  M   F  + K++ NK +NSR +FM +DL +LRK++W  RRK++ AKTLD+I+K+ E E R                                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                         A   ++ L  +I G   EY+S KD+KE +L  +E        +  C + +    + K  ER A + + ++L ++  LP+ + E AL+ I+EF+ D AVD PK   + G  +  L+  +A++F ++ + C        P
Sbjct:  779 EALCQLFATIGKTIDSSGSREAMDAYFAKIAKMSKNKKLNSRSRFMYQDLIDLRKNNWKSRRKEEGAKTLDEIKKDFEREERAA----------------------------QRQSAVANAGYRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVDEDGFSTVPMGRGRRGSSGPSPSILQRKQMVPPARKQQQSRQQSARPSASQKRASAPLDTDELKKRIKGVRAEYMSLKDEKEVILCAEEWSGTDGWSDVFCTESIEKALDCKEDERQAIISMFKILCKKSMLPEKSFEVALTQILEFMNDFAVDIPKVYEYMGDLVANLLLFEAIKFSWLCDLCANFLESTAP 1105          
BLAST of mRNA_L-elsbetiae_contig7988.16959.1 vs. uniprot
Match: A0A7S1VSA7_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VSA7_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.200e-12
Identity = 127/349 (36.39%), Postives = 174/349 (49.86%), Query Frame = 0
Query:    1 QALGKLIRTIGSTLDSTNNRTYMKELFRLMDKIANNKTINSRMKFMIRDLEELRKHSWVPRRKQDKAKTLDDIRKEAEAEARGGGAPPGRXXXXXXXXXXXXXXXXPQDVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAEQPSETLVNKINGFVNEYISE-KDKKEALLSFDELPKGPIPETVCDKIVSG-VFEGKAAERPARVELLRVLAREKKLPQAALERALSPIIEFLTDIAVDAPKAETHFGVCLGVLISEKALQFPFVTENCQK 347
            +A   +  T+G T+DS     +M   F  M K++N K ++SR +FM +DL ELR ++W PRRK +KAKTLD+IRK+ E E R       R                 Q  R                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXX                    P E +  +++    EY+ +  + +E LLS DEL   P    +  +  S  +FE K +ER A V +++ L + KKL  + +++  S  +EF+  + +DAP+A  + G  L  L+   A+  P++ E C+K
Sbjct:  411 EAACSMFTTVGKTIDSLAANRFMGVCFAKMAKLSNYKALSSRSRFMYKDLIELRANAWEPRRKVEKAKTLDEIRKDVEREER-------RQAMESSKYNKNDRQRGHQGNRRNNDFNSNRSDRRISSSSTGSSRNRLSSKPVAQTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRPSAQTXXXXXXXXXXXQASRPQAVVEEKPKSKHEALPKEKVKRRVDNMRAEYMQDPSNTEELLLSMDELSGTPDSGVMLVQHYSDRLFECKDSEREAMVVIIKFLYQNKKLSASDVQKGTSESVEFIDSLVIDAPRAYEYLGDMLSTLLEIGAIDLPWLIEQCKK 752          
BLAST of mRNA_L-elsbetiae_contig7988.16959.1 vs. uniprot
Match: A0A7S1D4U0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D4U0_CYCTE)

HSP 1 Score: 75.5 bits (184), Expect = 1.520e-11
Identity = 37/82 (45.12%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 QALGKLIRTIGSTLDSTNNRTYMKELFRLMDKIANNKTINSRMKFMIRDLEELRKHSWVPRRKQDKAKTLDDIRKEAEAEAR 82
            +A   +  TIG T+++    ++++  F  M K++NNK++++R +FM +DL ELR++ W PRRKQ+KAKTLD+IRK+ E E R
Sbjct:  188 EAACNMFATIGKTIETPQASSFLRVCFDKMTKLSNNKSLSARSRFMYKDLLELRQNRWEPRRKQEKAKTLDEIRKDVEREER 269          
BLAST of mRNA_L-elsbetiae_contig7988.16959.1 vs. uniprot
Match: A0A7S2YBQ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YBQ4_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 5.400e-11
Identity = 38/82 (46.34%), Postives = 58/82 (70.73%), Query Frame = 0
Query:    1 QALGKLIRTIGSTLDSTNNRTYMKELFRLMDKIANNKTINSRMKFMIRDLEELRKHSWVPRRKQDKAKTLDDIRKEAEAEAR 82
            +A+  +  TIGST+D   + T+M   F  +  +A +K + SR +FM +DL +LRK++WVPRRK++KAKTL++IRK+ E E R
Sbjct:  732 EAICSMFTTIGSTIDKPASATFMAVCFNKISDLATDKNLPSRSRFMYKDLIDLRKNNWVPRRKEEKAKTLEEIRKDVEREER 813          
BLAST of mRNA_L-elsbetiae_contig7988.16959.1 vs. uniprot
Match: D0NP07_PHYIT (Eukaryotic translation initiation factor 4 gamma, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NP07_PHYIT)

HSP 1 Score: 72.8 bits (177), Expect = 5.140e-10
Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    1 QALGKLIRTIGSTLDSTNNRTYMKELFRLMD-KIANNKTINSRMKFMIRDLEELRKHSWVPRRKQDKAKTLDDIRKEAEAEARGGGAPP 88
            ++L KL+ T+G  LD    + +M   F  ++ K+  +K ++SR+ FMI+D+ ELR+H W PRRK+ K KTL++IRKEAE EAR   APP
Sbjct:  420 ESLAKLLTTMGKDLDKHGAQGFMPSYFHYLENKLVKDKRLSSRITFMIKDVIELRQHRWEPRRKELKQKTLNEIRKEAEREAR---APP 505          
BLAST of mRNA_L-elsbetiae_contig7988.16959.1 vs. uniprot
Match: A0A662YG00_9STRA (MI domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YG00_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 5.700e-10
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    1 QALGKLIRTIGSTLDSTNNRTYMKELFRLMD-KIANNKTINSRMKFMIRDLEELRKHSWVPRRKQDKAKTLDDIRKEAEAEARGGGAPP 88
            ++L KL+ T+G  LD    + +M   F+ ++ K+  NK ++SR+ FMI+D+ ELR+H W PRRK+ K KTL +IRKEAE EAR   APP
Sbjct:  824 ESLCKLLITMGKDLDKHGAQGFMPSYFQYLEHKLVKNKRLSSRINFMIKDVIELRQHRWEPRRKELKQKTLTEIRKEAEREAR---APP 909          
BLAST of mRNA_L-elsbetiae_contig7988.16959.1 vs. uniprot
Match: A0A833SWD3_PHYIN (Macrophage migration inhibitory factor domain-containing protein4G n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SWD3_PHYIN)

HSP 1 Score: 72.8 bits (177), Expect = 5.730e-10
Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    1 QALGKLIRTIGSTLDSTNNRTYMKELFRLMD-KIANNKTINSRMKFMIRDLEELRKHSWVPRRKQDKAKTLDDIRKEAEAEARGGGAPP 88
            ++L KL+ T+G  LD    + +M   F  ++ K+  +K ++SR+ FMI+D+ ELR+H W PRRK+ K KTL++IRKEAE EAR   APP
Sbjct:  860 ESLAKLLTTMGKDLDKHGAQGFMPSYFHYLENKLVKDKRLSSRITFMIKDVIELRQHRWEPRRKELKQKTLNEIRKEAEREAR---APP 945          
BLAST of mRNA_L-elsbetiae_contig7988.16959.1 vs. uniprot
Match: W2QF31_PHYPN (MI domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2QF31_PHYPN)

HSP 1 Score: 72.8 bits (177), Expect = 5.730e-10
Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    1 QALGKLIRTIGSTLDSTNNRTYMKELFRLMD-KIANNKTINSRMKFMIRDLEELRKHSWVPRRKQDKAKTLDDIRKEAEAEARGGGAPP 88
            ++L KL+ T+G  LD    + +M   F  ++ K+  +K ++SR+ FMI+D+ ELR+H W PRRK+ K KTL++IRKEAE EAR   APP
Sbjct:  858 ESLAKLLTTMGKDLDKHGAQGFMPSYFHYLENKLVKDKRLSSRITFMIKDVIELRQHRWEPRRKELKQKTLNEIRKEAEREAR---APP 943          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7988.16959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBU9_9PHAE9.680e-11369.50MI domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7G664_ECTSI2.560e-8443.41Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus... [more]
A0A7S2PHU1_9STRA1.040e-1231.83Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S1VSA7_9STRA1.200e-1236.39Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A7S1D4U0_CYCTE1.520e-1145.12Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2YBQ4_9STRA5.400e-1146.34Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
D0NP07_PHYIT5.140e-1047.19Eukaryotic translation initiation factor 4 gamma, ... [more]
A0A662YG00_9STRA5.700e-1048.31MI domain-containing protein n=2 Tax=Nothophytopht... [more]
A0A833SWD3_PHYIN5.730e-1047.19Macrophage migration inhibitory factor domain-cont... [more]
W2QF31_PHYPN5.730e-1047.19MI domain-containing protein n=12 Tax=Phytophthora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003891Initiation factor eIF-4 gamma, MA3SMARTSM00544ma3_7coord: 225..337
e-value: 1.1E-4
score: 31.5
IPR003891Initiation factor eIF-4 gamma, MA3PFAMPF02847MA3coord: 228..337
e-value: 2.2E-8
score: 34.1
IPR003891Initiation factor eIF-4 gamma, MA3PROSITEPS51366MIcoord: 224..346
score: 13.543
IPR016021MIF4G-like domain superfamilyGENE3D1.25.40.180coord: 1..70
e-value: 1.7E-16
score: 62.1
IPR016021MIF4G-like domain superfamilyGENE3D1.25.40.180coord: 218..405
e-value: 9.5E-22
score: 79.4
NoneNo IPR availablePANTHERPTHR23253EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMAcoord: 2..334
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 220..371
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 3..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7988contigL-elsbetiae_contig7988:133..8269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7988.16959.1mRNA_L-elsbetiae_contig7988.16959.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7988 133..8269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7988.16959.1 ID=prot_L-elsbetiae_contig7988.16959.1|Name=mRNA_L-elsbetiae_contig7988.16959.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=417bp
QALGKLIRTIGSTLDSTNNRTYMKELFRLMDKIANNKTINSRMKFMIRDL
EELRKHSWVPRRKQDKAKTLDDIRKEAEAEARGGGAPPGRGGSSRGGDFR
GGGQGGPQDVRAARRAEQRGGGGGGPADGFQQQRGGGSDRRNHDSRQDPR
FSQQGARDSRGGGGGQSSSGRGGRPEPQSSSSRDRERDRRGGDDRRGGAA
PATVSPSPPPPPAAAAVAEQPSETLVNKINGFVNEYISEKDKKEALLSFD
ELPKGPIPETVCDKIVSGVFEGKAAERPARVELLRVLAREKKLPQAALER
ALSPIIEFLTDIAVDAPKAETHFGVCLGVLISEKALQFPFVTENCQKHCP
KIIPKIFTALLTVRSPPLAREILETQNFGLPQLFPQKADAVEYLGANKLW
ILQPGLWVSSIVEPRLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003891Initiation_fac_eIF4g_MI
IPR016021MIF4-like_sf
IPR016024ARM-type_fold