prot_L-elsbetiae_contig7985.16957.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7985.16957.1
Unique Nameprot_L-elsbetiae_contig7985.16957.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length387
Homology
BLAST of mRNA_L-elsbetiae_contig7985.16957.1 vs. uniprot
Match: A0A6H5K2P5_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P5_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 3.430e-49
Identity = 105/150 (70.00%), Postives = 114/150 (76.00%), Query Frame = 0
Query:    1 SLVELGSVDGEG-VPDPHPSVLRDLARRCLVSGLQRKVSRQACNPLALCTGSLPSWCVGLPREFPSLFSLDTRLKLLKKTAFGMARAVAHTQEKAKKVEDLPSQVSQPRSPIRVAGLVPAAXXXXXXXXFAGGADSPASAAVPLPELLRQ 149
            SLV  GSV G+G +PDPHPSVL DLARRC+VSGLQRK    ACNPLALCTGSLPSWCVGLPREFPSLFSL+TRL LL+KTAFGMARAVAH QEKAK VED+P+  +   S    AG   A          A GADSPAS A+PLPELLRQ
Sbjct: 1433 SLVSHGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRK----ACNPLALCTGSLPSWCVGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLGS---AAGTARAGGGVLRRVVGADGADSPASLAMPLPELLRQ 1575          
BLAST of mRNA_L-elsbetiae_contig7985.16957.1 vs. uniprot
Match: D7FHF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF2_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 4.570e-47
Identity = 89/124 (71.77%), Postives = 97/124 (78.23%), Query Frame = 0
Query:   35 RKVSRQACNPLALCTGSLPSWCVGLPREFPSLFSLDTRLKLLKKTAFGMARAVAHTQEKAKKVEDLPSQVSQPRSPIRVAGLVPAAXXXXXXXXFAGGADSPASAAVPLPELLRQLGRLGRLTV 158
            R  S+QACNPLALCTGSLPSWCVGLPREFPSLFSL+TRL LL+KTAFGMARAVAH QEKAK VED+P+  +  RS    AG   A          AGGADSPAS A+PLPELLRQLGRLGRLT+
Sbjct:    3 RGYSKQACNPLALCTGSLPSWCVGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLRS---AAGTARAGGGVLRRVGGAGGADSPASLAMPLPELLRQLGRLGRLTI 123          
BLAST of mRNA_L-elsbetiae_contig7985.16957.1 vs. uniprot
Match: A0A2R6RBR7_ACTCC (HECT-type E3 ubiquitin transferase n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6RBR7_ACTCC)

HSP 1 Score: 62.8 bits (151), Expect = 7.370e-7
Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 0
Query:   17 HPSVLRDLARRCLVSGLQRKVSRQACNPLALCTGSLPSWCVGLPREFPSLFSLDTRLKLLKKTAFGMARAVAHTQ 91
            + SV+R  +   + S L  K++RQ  + LALC+GSLPSWC  L +  P LF L+TR +    TAFG++RA+   Q
Sbjct: 1358 NASVVRVSSEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPLETRRQYFYSTAFGLSRALYRLQ 1432          
BLAST of mRNA_L-elsbetiae_contig7985.16957.1 vs. uniprot
Match: A0A8E0RZ16_9TREM (E3 ubiquitin-protein ligase n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0RZ16_9TREM)

HSP 1 Score: 62.0 bits (149), Expect = 9.760e-7
Identity = 33/59 (55.93%), Postives = 42/59 (71.19%), Query Frame = 0
Query:   30 VSG-LQRKVSRQACNPLALCTGSLPSWCVGLPREFPSLFSLDTRLKLLKKTAFGMARAV 87
            VSG L +K+ RQ  +PLAL +G+LP WC+GL R    LFS ++RL+LLK  AFG AR V
Sbjct:  590 VSGRLTQKLLRQIRDPLALSSGALPDWCLGLSRHLAPLFSFESRLELLKAQAFGPARLV 648          
BLAST of mRNA_L-elsbetiae_contig7985.16957.1 vs. uniprot
Match: A0A5K1H120_9MAGN (HECT domain-containing protein (Fragment) n=16 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1H120_9MAGN)

HSP 1 Score: 61.6 bits (148), Expect = 1.160e-6
Identity = 30/62 (48.39%), Postives = 41/62 (66.13%), Query Frame = 0
Query:   31 SGLQRKVSRQACNPLALCTGSLPSWCVGLPREFPSLFSLDTRLKLLKKTAFGMARAVAHTQE 92
            S L  K++RQ  +PLALC+GSLPSWC  L +  P LF  +TR +    TAFG++RA+   Q+
Sbjct:  283 SKLTPKLARQIQDPLALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALHRLQQ 344          
BLAST of mRNA_L-elsbetiae_contig7985.16957.1 vs. uniprot
Match: A0A1Q2YJC3_9ASCO (HECT domain-containing protein n=1 Tax=Pichia membranifaciens TaxID=4926 RepID=A0A1Q2YJC3_9ASCO)

HSP 1 Score: 62.0 bits (149), Expect = 1.170e-6
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   33 LQRKVSRQACNPLALCTGSLPSWCVGLPREFPSLFSLDTRLKLLKKTAFGMARAVAHTQEKAKKVEDLPSQVSQP 107
            L  K++RQ   PL + +G LP W + +PREFP LF L+TRL  LK T+FG +R +     K+K+ ED  S    P
Sbjct:  601 LSAKLNRQLDEPLLVASGILPDWAIIIPREFPFLFPLETRLFFLKSTSFGYSRLIDFWSSKSKE-EDSDSNTRNP 674          
BLAST of mRNA_L-elsbetiae_contig7985.16957.1 vs. uniprot
Match: A0A7I8K2Z8_SPIIN (HECT-type E3 ubiquitin transferase n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K2Z8_SPIIN)

HSP 1 Score: 62.0 bits (149), Expect = 1.300e-6
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   33 LQRKVSRQACNPLALCTGSLPSWCVGLPREFPSLFSLDTRLKLLKKTAFGMARAVAHTQE 92
            L  K++RQ  + LALC+GSLPSWC  LPR  P LF  +TR      TAFG++RA+   Q+
Sbjct: 1387 LSPKLARQIQDALALCSGSLPSWCYQLPRACPFLFPFETRRDFFYSTAFGLSRALHRLQQ 1446          
BLAST of mRNA_L-elsbetiae_contig7985.16957.1 vs. uniprot
Match: A0A1E3NKP6_9ASCO (HECT-type E3 ubiquitin transferase (Fragment) n=1 Tax=Pichia membranifaciens NRRL Y-2026 TaxID=763406 RepID=A0A1E3NKP6_9ASCO)

HSP 1 Score: 61.2 bits (147), Expect = 2.170e-6
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   33 LQRKVSRQACNPLALCTGSLPSWCVGLPREFPSLFSLDTRLKLLKKTAFGMARAVAHTQEKAKKVEDLPSQVSQP 107
            L  K++RQ   PL + +G LP W + +PREFP LF L+TRL  LK T+FG +R +     K+K+ ED  S    P
Sbjct:  920 LSAKLNRQLDEPLLVASGILPDWAIIIPREFPFLFPLETRLFFLKSTSFGYSRLIDFWSSKSKE-EDSNSTTRNP 993          
BLAST of mRNA_L-elsbetiae_contig7985.16957.1 vs. uniprot
Match: A0A067FKX6_CITSI (HECT domain-containing protein n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067FKX6_CITSI)

HSP 1 Score: 60.8 bits (146), Expect = 2.900e-6
Identity = 34/91 (37.36%), Postives = 49/91 (53.85%), Query Frame = 0
Query:    2 LVELGSVDGEGVPDPHPSVLRDLARRCLVSGLQRKVSRQACNPLALCTGSLPSWCVGLPREFPSLFSLDTRLKLLKKTAFGMARAVAHTQE 92
            +  L  + G GV  P+   +         S L  K++RQ  + LALC+GSLPSWC  L +  P LF  +TR +    TAFG++RA+   Q+
Sbjct:  946 ISSLDELSGTGVRVPYEEFIN--------SKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQ 1028          
BLAST of mRNA_L-elsbetiae_contig7985.16957.1 vs. uniprot
Match: A0A2J6L7G1_LACSA (HECT-type E3 ubiquitin transferase n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6L7G1_LACSA)

HSP 1 Score: 60.8 bits (146), Expect = 2.990e-6
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0
Query:   21 LRDLARRCLVSGLQRKVSRQACNPLALCTGSLPSWCVGLPREFPSLFSLDTRLKLLKKTAFGMARAVAHTQE 92
            +R L+   + S L  K+SRQ  + LALC+GSLPSWC  L +  P LF  +TR +    TAFG++RA+   Q+
Sbjct: 1290 VRVLSDEFVNSKLTSKLSRQIQDVLALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALHRLQQ 1361          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7985.16957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2P5_9PHAE3.430e-4970.00HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FHF2_ECTSI4.570e-4771.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2R6RBR7_ACTCC7.370e-744.00HECT-type E3 ubiquitin transferase n=1 Tax=Actinid... [more]
A0A8E0RZ16_9TREM9.760e-755.93E3 ubiquitin-protein ligase n=1 Tax=Fasciolopsis b... [more]
A0A5K1H120_9MAGN1.160e-648.39HECT domain-containing protein (Fragment) n=16 Tax... [more]
A0A1Q2YJC3_9ASCO1.170e-644.00HECT domain-containing protein n=1 Tax=Pichia memb... [more]
A0A7I8K2Z8_SPIIN1.300e-650.00HECT-type E3 ubiquitin transferase n=2 Tax=Spirode... [more]
A0A1E3NKP6_9ASCO2.170e-644.00HECT-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
A0A067FKX6_CITSI2.900e-637.36HECT domain-containing protein n=1 Tax=Citrus sine... [more]
A0A2J6L7G1_LACSA2.990e-644.44HECT-type E3 ubiquitin transferase n=3 Tax=Lactuca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45670:SF1E3 UBIQUITIN-PROTEIN LIGASE TRIP12coord: 29..173
NoneNo IPR availablePANTHERPTHR45670FAMILY NOT NAMEDcoord: 29..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7985contigL-elsbetiae_contig7985:219..4453 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7985.16957.1mRNA_L-elsbetiae_contig7985.16957.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7985 219..4453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7985.16957.1 ID=prot_L-elsbetiae_contig7985.16957.1|Name=mRNA_L-elsbetiae_contig7985.16957.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=387bp
SLVELGSVDGEGVPDPHPSVLRDLARRCLVSGLQRKVSRQACNPLALCTG
SLPSWCVGLPREFPSLFSLDTRLKLLKKTAFGMARAVAHTQEKAKKVEDL
PSQVSQPRSPIRVAGLVPAAAAAGGGGGFAGGADSPASAAVPLPELLRQL
GRLGRLTVLLSRESILEMATFLFGLLVNGQQPTPTPTPPPTQRPPPPAPS
SSSSAAGSAQQQQQQQQQHSRRTPGGGGSSSSSGPGPSSSSSAASGAGSG
RRGAIGGGGGGGGAGSTGGAGSTGGGGSAASASAVSASSRPGYPSGGGGG
GGGGGGRGLFGSSPFYEDEEEEDEDEDEEGEGDGDEEEEEEEEEVDHEDD
GWDIMDGDEEEEEEEVVVGESYEDDEDMLDEVVVSW*
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