prot_L-elsbetiae_contig798.16952.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig798.16952.1
Unique Nameprot_L-elsbetiae_contig798.16952.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length313
Homology
BLAST of mRNA_L-elsbetiae_contig798.16952.1 vs. uniprot
Match: D8LJM7_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM7_ECTSI)

HSP 1 Score: 502 bits (1293), Expect = 1.020e-175
Identity = 246/311 (79.10%), Postives = 271/311 (87.14%), Query Frame = 0
Query:    1 MWNTTDGSTWTQVTSVNLHERRHVGALQEVDGALFVGYGMPFALTPEVSVGALRVIDLGGGSTQEIVNAATGFAHASRINCVKVVKVGADSRVYTGDEHGGITTWARPTPGGAFAQLARLEGHVRAVTSLVLTASNGMLWSSSEDGTIRIWNTATNACEHTITKDNGGHEGAVVGLAIGQSAAEGALAEYIISGSKDGTMGVFQAADGALTYKHKCGDGISAIAAFDPTPGTSALMLVGYEDGTIAVRNFPEFALAFELHPDSIYVGHSKKVHALLPFNNAAIEDSYFLSAGEEGKMICWKVHKLTDSSPA 311
            MW+TTDGSTWTQVTSV + E RHVG LQEV+G L+VGYG P+A   +V+V ALRV+DL  GSTQE+V++ TGFAHASRIN + V KVGA+ RVYTGDE G IT WARP+PG  FAQLA+LEGH RA+TSLV TASNGMLWSSSEDGTIRIWNT TNAC HTITKDNGGHEG V  LAIGQSAAEG LAEY+ISGSKDGTMGVFQAADG LTYKHKCG G+SAIAAFDPTPGTSAL+LVGYEDGTIAVRNFPEFALAFE+HP S+YVGHSK V ALLPFNN +I+D YFLSAGE+G M+CW VHKLTD SPA
Sbjct:  132 MWSTTDGSTWTQVTSVQMTEWRHVGDLQEVEGVLYVGYGTPYAHLADVTVDALRVMDLTSGSTQEVVSSVTGFAHASRINRIMVAKVGAEPRVYTGDEEGRITAWARPSPGAPFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRIWNTGTNACVHTITKDNGGHEGPVAALAIGQSAAEGTLAEYVISGSKDGTMGVFQAADGGLTYKHKCGTGVSAIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFEIHPTSLYVGHSKPVLALLPFNNPSIDDGYFLSAGEDGTMMCWNVHKLTDPSPA 442          
BLAST of mRNA_L-elsbetiae_contig798.16952.1 vs. uniprot
Match: A0A835YKE1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE1_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.020e-39
Identity = 111/349 (31.81%), Postives = 168/349 (48.14%), Query Frame = 0
Query:    1 MWNTTDGSTWTQVTSVNLHERRHVGALQEVDGALFVGYGMPFALTPE------------------------------------------VSVGALRVIDLGGG---STQEIVNAATGFAHASRINCVKVVKVGADSRV-YTGDEHGGITTWARPTPGGAFAQLARLEGHVRAVTSLVLTASNGMLWSSSEDGTIRIWNTATNACEHTITKDNG-GHEGAVVGLAIGQSAAEGALAEYIISGSKDGTMGVFQAADGALTYKHKCGDGISAIAAFDPTPGTSALMLVGYEDGTIAVRNFPEFALAFELHPDSIYVGHSKKVHALLPFNNAAIEDSYFLSAGEEGKMICWKV 302
            MW T DG+ W +   V+L     V +L  VD  +   Y  PFAL  +                                          ++VG +R+++L GG   + + +++    +AH   INC+  +K  A + V ++G + G I  W     G  F     LEGHVR VT L +  +  MLWS+S+D T+R+W+TAT AC   I    G GH+GAV  +A G  + EG   EY+++GS D +                    ++A+  F  +P +  L+L+G +DG+IA+R+FP F+LAFEL    + VGH   V ALLP       + YF+S  E+GKM+ W++
Sbjct:   64 MWTTADGAVWNEAAKVDLTPHLSVTSLLVVDPFVACAYEAPFALAAQPXXXXXXXXXXXQQQRGYGGAPGALRGDDAAGALQPPRAERMITVGMIRMLNLRGGEPAAVEVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWK--AQGTGFQLGGVLEGHVRGVTCLCMVGN--MLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMA-GPLSIEGEQGEYMVTGSADKS--------------------VTALTCFKTSP-SGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPG-PNLYFMSGAEDGKMMMWQM 385          
BLAST of mRNA_L-elsbetiae_contig798.16952.1 vs. uniprot
Match: A0A6U5LIP5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5LIP5_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 4.020e-18
Identity = 88/290 (30.34%), Postives = 127/290 (43.79%), Query Frame = 0
Query:   24 VGALQEVDGALFVGYGMPFALTPEVSVGALRVIDLGGGST--QEIV---NAATGFAHASRINCVKVVKVGADS-RVYTGDEHGGITTWARPTPGGAFAQLARLEGHVRAVTSLVLTASNGMLWSSSEDGTIRIWNTATNACEHTITKDNGGHEGAVVGLAIGQSAAEGALAEYIISGSKDGTMGVFQAADGALTYKHKCGDGISAIAAFDPTPGTSALMLVGYEDGTIAVRNFP------EFALAFELHPDSIYVGHSKKVHALLPFNNAAIEDSYFLSAGEEGKMICWK 301
            VGAL   +  LF G+     L P V VG++   +L   ++  QE     +A   +AH   +  +  V  GA    V +  E G I  W   T  G F     L GH RAV+ L    S G+LWS SED +IR+W+ +  +C   I   + GH G V  L    S   GA   ++ S S DGT+  +  A G +      GDG+  I       G + L++ G E G I VR+ P         L  +L  D     H+      +     A     F S+G++GK++ W+
Sbjct:  163 VGALVVSNNLLFCGFEKECPLLPGVKVGSIHAWNLQNAASPPQEFHAEDSAVHPYAHGRIVTSLLPVPDGAGGVAVVSSSEDGLIRVWRFDTGTGKFMVFRSLMGHARAVSGLAY--SEGLLWSGSEDHSIRMWDMSKGSCGKVIAGGSEGHSGPVTSLLAWGSEKLGA---FVFSSSLDGTIKAWDPA-GKMLKMESHGDGVMTIVTTTDEAG-NPLLVCGLERGNIMVRSLPGAGDLPALTLLIKLS-DQYTCSHTNGPVRCV--QAGAGPAGIFYSSGDDGKLMVWQ 442          
BLAST of mRNA_L-elsbetiae_contig798.16952.1 vs. uniprot
Match: A0A7S3HF87_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HF87_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.650e-17
Identity = 67/213 (31.46%), Postives = 109/213 (51.17%), Query Frame = 0
Query:   93 VYTGDEHGGITTWARPTPGGAFAQLARLEGHVRAVTSLVLTASNGMLWSSSEDGTIRIWNTATNACEHTITKDNGG--HEGAVVGLA-IGQSAAEGALAEYIISGSKDGTMGVFQAADGALTYKHKCGDGISAIAAFDPTPGTSALMLVGYEDGTIAVRNFPEFALAFELHPDSIYVGHSKKVHALLPFNNAAIEDSYFLSAGEEGKMICWKV 302
            V T    G I TW      G F Q+  LEGH+RAVT+++L  +  +LWS S D T+R+W+ A+  C  T+   NGG  H  AV  L  +  + AE     +I SG+ D  + ++    G+L +    G  ++++ AF  T G   ++L+G  DGTI VR+     + F L      + H+K + +++         S F +  ++G+++ WKV
Sbjct:  226 VITAGGEGLIRTWRFDASKGGFEQIMVLEGHIRAVTTVLLNGA--LLWSGSVDSTLRVWDLASGKCLATLAAANGGPGHTQAVTCLEFVPNTGAE----PFIASGAADNAVKLW-GTTGSLLHTVTHGAMVTSLKAFKDTLGGIQVLLIGLLDGTIHVRSCMSMKILFTLDAS---ICHTKAIWSIVDLGQ-----SCFGAGSDDGQIVVWKV 423          
BLAST of mRNA_L-elsbetiae_contig798.16952.1 vs. uniprot
Match: A0A7R9WQC1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WQC1_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 3.540e-14
Identity = 77/249 (30.92%), Postives = 106/249 (42.57%), Query Frame = 0
Query:   73 FAHASRINCVKVVKVGADSRVYTGDEHGGITTW---ARPTPG-GAFAQLARLEGHVRAVTSLVLTASNGMLWSSSEDGTIRIWNTATNACEHTITKDNG--------------GHEGAVVGLAIGQSAAEGALAEYIISGSKDGTMGVFQAADGALTYKHKCGDGISAIAAFDPTPGTSALMLVGYEDGTIAVRNF------PEFALAFELHPDSIYVGHSKKVHALLPFNNAAIEDSYFLSAGEEGKM 297
            ++HA+R++ + V+      +V +G   G I  W   A    G G F     L GH R VT L +  +  +LWSSS DG+IRIW+ A+  C+H IT                  GH+ AV  L    S +      +I++ S DG +  +  + G        G+G+  IA          L L+G E G I VRN       P F L   L      VGH   V AL     A    S F S G +GK+
Sbjct:   20 YSHATRVSALNVI---GGQKVISGSRDGCIRLWTFEASSNQGKGGFVLSKTLAGHAREVTGLAV--AENVLWSSSIDGSIRIWDLASGNCQHAITNSGTNAQQSGQPPAGGGQGHKDAVTCLIPFPSPS----GTFILTSSLDGDIKAWNGSTGQCVASESHGEGVVTIAMAADQKNNQVL-LIGLESGNIMVRNLLQTPNMPAFTLIMMLSLQ-YSVGHRGPVKAL-----AQGPSSTFYSGGGDGKV 252          
BLAST of mRNA_L-elsbetiae_contig798.16952.1 vs. uniprot
Match: A0A7S0CBB5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBB5_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.170e-7
Identity = 52/161 (32.30%), Postives = 71/161 (44.10%), Query Frame = 0
Query:   73 FAHASRINCVKVVKVGADSRVYTGDEHGGITTW---------------ARPTPGGAFAQLARLEGHVRAVTSLVLTASNGMLWSSSEDGTIRIWNTATNACEHTIT------------------KDNGGHEGAVVGLAIGQSAAEGALAEYIISGSKDGTM 200
            +AHA  ++ + V K   D  V +G + G I  W               A  +P   F  L  L GH R +T LVL  +  M+WSSS D TIR+W+  T  C+H IT                  +   GH  AV  L + +S  EG   E+I+S S DG +
Sbjct:    1 YAHAMGVSSLLVTK---DMVVVSGSKDGTIRIWKFTTTNPAVATPGAVAPASPASEFLLLNTLFGHAREITGLVLI-NMSMIWSSSTDYTIRLWDANTGQCQHLITSAEEKTPPPGGNMLAPADRAKKGHTHAVTSLLVWKS--EGG--EFILSSSLDGKV 153          
BLAST of mRNA_L-elsbetiae_contig798.16952.1 vs. uniprot
Match: A0A6U3AW41_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3AW41_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 3.520e-6
Identity = 79/361 (21.88%), Postives = 129/361 (35.73%), Query Frame = 0
Query:    1 MWNTTDGSTWTQVTSVNLHERRHVGALQEVDGA-LFVGYGMPFALTPEVSVGALRVIDLGGGSTQ----EIVNAATGFAHASRINCVKV-----------------VKVGADSRVYTGDEHGGITTWARPTPGGAFAQLARLEGHVRAVTSLVLTASNGMLWSSSEDGTIRIWN----TATNACEHTITKDNGGH--------------EGAVVGLAIGQSAAEGALAEY-------IISGSKDGTMGVFQAADGALTYKHKCGDGISAIAAF-------------DPTPGTSALMLVGYEDGTIAVRNFPEFALAFELHPDSIYVGHSKKVHALLPFNNAAIEDSYFLSAGEEGKMICWK 301
            MWNT+ G  +++    N+  +  V  LQ    + L+ G+     L P+V VG +   +L     Q    ++      ++H+  +  + V                       S V TG + G I  W     G  F+ +  L GH R +T L+L     +LWS          +        AC++ IT+D  G                    G  +G SAA  AL  +       ++S S DGT+  + +  G         +G+  IA               DP  G   ++L+G E G IA R+  +           I  G     H+      A    + F + G +G ++ W+
Sbjct:  156 MWNTSQG--FSKQAETNMKGK--VECLQVFQNSFLYCGFEAVSTLLPDVPVGMVNAWNLQNPGPQPMELQVDPQHLPYSHSQSVTAIAVGGXXXXXXXXXXXXXXXXXXXGPSVVVTGSKDGSIRLWTMQG-GTTFSLVRTLPGHTRQITGLLLIPGGSLLWSXXXXXXXXXXDLNQSVPEKACQYCITRDTPGAVPNSTTGGANPQNANNNTQGSGVGHSAAVTALVPFTSPAGTFVLSSSLDGTIKAWDSNTGQCVANETHTEGVVTIALAQAAPAQQGQPAPNDPNGGAPQVLLIGLESGNIACRSLVQTQNTPAFALLFILSGKYTAAHSGAVKAIAPGPSATFYTGGNDGNLMVWQ 511          
BLAST of mRNA_L-elsbetiae_contig798.16952.1 vs. uniprot
Match: A0A7R9UGD6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGD6_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 6.920e-6
Identity = 75/290 (25.86%), Postives = 107/290 (36.90%), Query Frame = 0
Query:   34 LFVGYGMPFALTPEVSVGALRVIDLGGGSTQE---IVNAATGFAHASRINCVKVVKVGADSRVYTGDEHGGITTWARPTPGGAFAQLARLEGHVRAVTSLVLTASNGMLWSSSEDGTIRIW--NTATNACEHTITK--------DNGGHEGAVVGLAIGQSAAEGALAEYIISGSKDGTMGVFQAADGALTYKHKCGDGISAIAAF---DPTPGTSAL--MLVGYEDGTIAVRNFP-EFALAFELHPDSIYVGHSKKVHALLPFNNAAIEDSYFLSAGEEGKMICWKVHK 304
            LFVG+     L P V VG L V ++          IVN AT FAH+SRI  + V      + + +G   G +  W      G F     L GHVR VTSL    S+G                N  ++  +    K        D GGH  AV  L +           +I+S   D  + V+ A         +CG  I  +      DPT   + L  + +    G   +R +  +  L       S   G+    H+         E   F SAG +GK++ W V +
Sbjct:  114 LFVGFDKESPLMPGVPVGMLGVYNVEAQPLARKDLIVNEATPFAHSSRIAAITV----GGALLISGGADGIVRLWKFDDAAGTFVFWQNLIGHVRPVTSLCFVESDGXXXXXXXXXXXXXXXXNITSSGAQCVDMKSAGRRNGDDPGGHSLAVTSLKLVPGTPP-----FILSAGVDQKLIVWNATTNEYCGGTECGAAIQEVELGTLPDPTADGNVLNCLFLSCRTGDFQIREWDSDLTLRISTTRRS---GNRGIAHSFGCSTLVVPEHGQFYSAGRDGKIMVWNVRQ 391          
BLAST of mRNA_L-elsbetiae_contig798.16952.1 vs. uniprot
Match: A0A5E4FYJ4_PRUDU (PREDICTED: zinc finger n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4FYJ4_PRUDU)

HSP 1 Score: 55.8 bits (133), Expect = 3.700e-5
Identity = 33/91 (36.26%), Postives = 47/91 (51.65%), Query Frame = 0
Query:   84 VVKVGADSRVYTGDEHGGITTWARPTPGGAFAQLARLEGHVRAVTSLVLTASNGMLWSSSEDGTIRIWNTATNACEHTITKDNGGHEGAVV 174
            V K   D     GD    +  W R   G  F+ LA+L+GH +AVT + L      L+S+S+DGT R+W+  T  C   I  D GG  G+++
Sbjct:   41 VCKFWVDGNCVKGDRCLYLHNWFR---GEGFSMLAKLQGHTKAVTGIALPERTNKLYSTSKDGTARVWDCHTGECGSVI--DLGGEAGSLI 126          
BLAST of mRNA_L-elsbetiae_contig798.16952.1 vs. uniprot
Match: A0A4Y1R045_PRUDU (Zinc finger WD40 repeat protein 1 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R045_PRUDU)

HSP 1 Score: 55.8 bits (133), Expect = 6.070e-5
Identity = 33/91 (36.26%), Postives = 47/91 (51.65%), Query Frame = 0
Query:   84 VVKVGADSRVYTGDEHGGITTWARPTPGGAFAQLARLEGHVRAVTSLVLTASNGMLWSSSEDGTIRIWNTATNACEHTITKDNGGHEGAVV 174
            V K   D     GD    +  W R   G  F+ LA+L+GH +AVT + L      L+S+S+DGT R+W+  T  C   I  D GG  G+++
Sbjct:  812 VCKFWVDGNCVKGDRCLYLHNWFR---GEGFSMLAKLQGHTKAVTGIALPERTNKLYSTSKDGTARVWDCHTGECGSVI--DLGGEAGSLI 897          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig798.16952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D8LJM7_ECTSI1.020e-17579.10C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YKE1_9STRA2.020e-3931.81WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A6U5LIP5_9STRA4.020e-1830.34Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3HF87_9STRA1.650e-1731.46Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7R9WQC1_9STRA3.540e-1430.92Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S0CBB5_9STRA2.170e-732.30Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A6U3AW41_9STRA3.520e-621.88Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7R9UGD6_9STRA6.920e-625.86Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A5E4FYJ4_PRUDU3.700e-536.26PREDICTED: zinc finger n=1 Tax=Prunus dulcis TaxID... [more]
A0A4Y1R045_PRUDU6.070e-536.26Zinc finger WD40 repeat protein 1 n=1 Tax=Prunus d... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 258..301
e-value: 130.0
score: 3.6
coord: 155..204
e-value: 0.65
score: 18.2
coord: 113..152
e-value: 9.8E-6
score: 35.1
coord: 63..106
e-value: 160.0
score: 3.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 117..152
e-value: 0.0011
score: 19.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 120..161
score: 14.251
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..310
e-value: 3.0E-29
score: 103.7
NoneNo IPR availablePANTHERPTHR44129FAMILY NOT NAMEDcoord: 80..250
coord: 69..163
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 139..153
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 120..213
score: 15.294
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 53..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig798contigL-elsbetiae_contig798:22777..28203 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig798.16952.1mRNA_L-elsbetiae_contig798.16952.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig798 19931..29022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig798.16952.1 ID=prot_L-elsbetiae_contig798.16952.1|Name=mRNA_L-elsbetiae_contig798.16952.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=313bp
MWNTTDGSTWTQVTSVNLHERRHVGALQEVDGALFVGYGMPFALTPEVSV
GALRVIDLGGGSTQEIVNAATGFAHASRINCVKVVKVGADSRVYTGDEHG
GITTWARPTPGGAFAQLARLEGHVRAVTSLVLTASNGMLWSSSEDGTIRI
WNTATNACEHTITKDNGGHEGAVVGLAIGQSAAEGALAEYIISGSKDGTM
GVFQAADGALTYKHKCGDGISAIAAFDPTPGTSALMLVGYEDGTIAVRNF
PEFALAFELHPDSIYVGHSKKVHALLPFNNAAIEDSYFLSAGEEGKMICW
KVHKLTDSSPAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf