prot_L-elsbetiae_contig797.16938.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig797.16938.1
Unique Nameprot_L-elsbetiae_contig797.16938.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length347
Homology
BLAST of mRNA_L-elsbetiae_contig797.16938.1 vs. uniprot
Match: D8LKQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ3_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 4.640e-34
Identity = 235/381 (61.68%), Postives = 257/381 (67.45%), Query Frame = 0
Query:    2 SDMHMAGGGVDRPVLSRARSSXXXXXXXXXXXXXXXXXXXXXXXXXX-------GVLGN-SGD---NGGAENQTELPACLVGILDSFFGG---SAGMANNGXXXXXXXXXXXXXXXXXXXXXXXAAP--RSPSTITGIEVSVGRSAFAQLGVHGLDDIKHLSGAGIIAPESVD--------------AVHSSAARGAAPADGFSLAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSPSACEGYSKKVGAGGV---GAATTPAAIAAAAEGISLLGL--SGKIGGDAGGVPSSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVPNPLKTVRITGTAEEVQLAEYLIRVRT-GRNISAA 346
            +DM+  GGG+DRP+L+R RS XXXXXXXXXXXXXXXXXXXXXXXXXX       G+LGN SG+   NGG  +  ELP+CLVGILDSF GG   S     N        XXXXXXXXXXXXXXXXAAP  RSPSTITGIE+ VGRSAFA+LG  GLDDIK LSGAGI APES +              AV+SSAARG AP DG  LAA+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +S S  EG+  + G  G    GAATTP AIAA   G+S L L  +        GV  SLA           XXXXXXXX             T  PN LKTV+ITGTAEEVQLAEYLIRV T G N++AA
Sbjct:   53 ADMN-GGGGMDRPLLTRGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXAGALHRGGMLGNMSGNGTGNGGVSDDGELPSCLVGILDSFLGGGGKSYVSDGNSIRSGSGGXXXXXXXXXXXXXXXXAAPPLRSPSTITGIEMEVGRSAFARLGERGLDDIKDLSGAGISAPESPEGYYHLSDEAAAAMGAVYSSAARGNAPCDGVGLAAANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTS-SPFEGFRLREGVRGNMSDGAATTPGAIAAVTGGVSRLVLDTTNSXXXXXNGVSPSLASAVGHVSGGLAXXXXXXXX-------------TAGPNSLKTVKITGTAEEVQLAEYLIRVSTTGGNMAAA 418          
BLAST of mRNA_L-elsbetiae_contig797.16938.1 vs. uniprot
Match: A0A6H5L8U0_9PHAE (KH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8U0_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 3.480e-29
Identity = 185/348 (53.16%), Postives = 199/348 (57.18%), Query Frame = 0
Query:   49 GVLGNSGDN----GGAENQTELPACLVGILDSFFGGS------------AGMANNGXXXXXXXXXXXXXXXXXXXXXXXAAP--RSPSTITGIEVSVGRSAFAQLGVHGLDDIKHLSGAGIIAPESVD--------------AVHSSAARGAAPADGFSLAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL-----------SSPSACEGYSKKVGAGGV---GAATTPAAIAAAAEGISLLGLSGKIGGDAGG---VPSSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVPNPLKTVRITGTAEEVQLAEYLIRVRT-GRNISAA 346
            G+LGN   N    GG  +  ELP+CLVGILDSF GG             +G  N G                       AAP  RSPSTITGIE+ VGRSAFA+LG  GLDDIK LSGAGI APES +              AV+SSAARG AP DG  LAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            SSP   EG+  K G  G    GAATTP AIAA   G+S LGL   +         V  SLA          XXXXXXXXX             T  PN LKTV+ITGTAEEVQLAEYLIRVRT G N++AA
Sbjct:  501 GMLGNMSGNXXXXGGVSDDGELPSCLVGILDSFLGGGGKSYVSDGNGIRSGSGNXGSVGNSNANEKNGNNNG-------AAPPLRSPSTITGIEMEVGRSAFARLGERGLDDIKDLSGAGISAPESPEGYCHLSDEALAAMGAVYSSAARGNAPCDGVGLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSPF--EGFGLKEGVRGNMGGGAATTPGAIAAVTGGVSRLGLGTTMSXXXXXXXXVSPSLASAVGQVSGGLXXXXXXXXX-------------TAGPNSLKTVKITGTAEEVQLAEYLIRVRTTGGNMAAA 826          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig797.16938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKQ3_ECTSI4.640e-3461.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8U0_9PHAE3.480e-2953.16KH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig797contigL-elsbetiae_contig797:18974..20014 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig797.16938.1mRNA_L-elsbetiae_contig797.16938.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig797 18418..20164 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig797.16938.1 ID=prot_L-elsbetiae_contig797.16938.1|Name=mRNA_L-elsbetiae_contig797.16938.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=347bp
MSDMHMAGGGVDRPVLSRARSSSSSGTGGGGAAVAVLDSGGGGVLHHGGV
LGNSGDNGGAENQTELPACLVGILDSFFGGSAGMANNGNGNGSNSGSSSN
NDDDNNNNNNAAAPRSPSTITGIEVSVGRSAFAQLGVHGLDDIKHLSGAG
IIAPESVDAVHSSAARGAAPADGFSLAASAASAATAAAAATSSASSVPKR
ALSSVQGGGAGGMSSGSSSSSLSSPSACEGYSKKVGAGGVGAATTPAAIA
AAAEGISLLGLSGKIGGDAGGVPSSLAAAAAAAAAARNAGGGGLALGGLG
GGGGGGGGGTVVPNPLKTVRITGTAEEVQLAEYLIRVRTGRNISAA*
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