prot_L-elsbetiae_contig797.16937.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig797.16937.1
Unique Nameprot_L-elsbetiae_contig797.16937.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length452
Homology
BLAST of mRNA_L-elsbetiae_contig797.16937.1 vs. uniprot
Match: A0A6H5L5W0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W0_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 3.760e-35
Identity = 125/328 (38.11%), Postives = 143/328 (43.60%), Query Frame = 0
Query:    1 MGRGQLKYRKRGGRGHGXXXXXXXXXXXXXXXXXANTFSDADPAPPDRTNKAKRRGGGQHSTSHLPSNTERWGLSFGEHRREGQQGYDTSRLIVGEWPVKTERPCSQKKIRVLCVCVFVFVSHCAVRSPGRRTGAASTSAVGFEETERLLDESEWATGASSWRLGAATAPPTRDEDQIECAAAASSELLSLNLDMLEKCLRRSAVHERLRLSHTYTAELEVDIREDPALEAAPASLSPARKGGGVEAAMVARLGGGG-------GRRGAGEQVGAEVGAPSTARGGXXXXXXXXXXXXXXXXXXXXXANATVEGDEDGVLDALLGLPA 321
            MGRGQLKYRKRGG+G G                 ++          + T    +R G    TSHLPSNTE+WG +FGE    G+QG                                           GRR  A STSAVG EETERLLDESEWA GASS RL A    P  D++    A AA  ELLSLNL++LE CLR    HERLRL H +TA+LE     +PA    P +  PA +G   E A  A  G GG          G GE VG     P+ A G                        A V  DE  VLD LLGL A
Sbjct:    1 MGRGQLKYRKRGGKGVGGTSRGGQAARGRGSSSGSS----------ESTAVHTKRSGRHDLTSHLPSNTEKWGRAFGEEH--GEQG----------------------------------------GGGGRR--AISTSAVGVEETERLLDESEWAIGASSRRLAA----PQEDDEPSYGAVAAPGELLSLNLEVLEVCLRTLPAHERLRLPHAFTAQLETQGEGNPA--PGPTAAFPAGEGEAAECARAAASGVGGVPEPVPGSTPGGGEHVGLGGPGPAAAAGATSPPL------------------AAVGNDEGAVLDTLLGLQA 250          
BLAST of mRNA_L-elsbetiae_contig797.16937.1 vs. uniprot
Match: D8LKQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ2_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 6.270e-32
Identity = 128/334 (38.32%), Postives = 152/334 (45.51%), Query Frame = 0
Query:    1 MGRGQLKYRKRGGRGHGXXXXXXXXXXXXXXXXXANTFSDADPAPPDRTNKAKRRGGGQHS-TSHLPSNTERWGLSFGE-HRREGQQGYDTSRLIVGEWPVKTERPCSQKKIRVLCVCVFVFVSHCAVRSPGRRTG----------AASTSAVGFEETERLLDESEWATGASSWRLGAATAPPTRDEDQIECAAAASSELLSLNLDMLEKCLRRSAVHERLRLSHTYTAELEVDIREDPALEAAPASLSPARKGGGVEAAMVARLGGGGGRRGAGEQVGAEVGAPSTARGGXXXXXXXXXXXXXXXXXXXXXANA---TVEGDEDGVLDALLGL 319
            MGRGQLKYRKRGGRG G        XXX      ++          + T    +R G +H  TSHLPSNTE+WG +FGE H   G++    +R + G   V + R     K   L        +   +R     TG          A STSAVG EETERLLDESEWA GASS  L A       D++    AAAA  ELL+LNL++LE CLR    HERLRL H  TA+LE     +PA    P +  PAR+G   E A  A   G             E G P    GG                      +A    V  DE  VLD LLGL
Sbjct:    1 MGRGQLKYRKRGGRGVGGTLRGGRAXXXRGSSGGSS----------ESTAVNTKRSGLRHDLTSHLPSNTEKWGRAFGEEHXXXGRR---KARWVGGWMGVFSTR--GTPKGAWLGASGLKSWTRVVLRQAPSTTGGXXXXXRGRRAISTSAVGVEETERLLDESEWAIGASSRHLAALQ----EDDEPSHGAAAAPGELLALNLEVLEVCLRTLPAHERLRLPHALTAQLETQGDGNPA--PGPTAALPAREGAAAECARAAAAAG-------------EGGVPEPVPGGTRGGDKNAGLGGPGPIASAGATSAPLAVVGNDEGAVLDTLLGL 300          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig797.16937.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5W0_9PHAE3.760e-3538.11Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LKQ2_ECTSI6.270e-3238.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..451

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig797contigL-elsbetiae_contig797:5716..12669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig797.16937.1mRNA_L-elsbetiae_contig797.16937.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig797 5697..13506 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig797.16937.1 ID=prot_L-elsbetiae_contig797.16937.1|Name=mRNA_L-elsbetiae_contig797.16937.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=452bp
MGRGQLKYRKRGGRGHGGPSSSGRGQAGRGGTGKANTFSDADPAPPDRTN
KAKRRGGGQHSTSHLPSNTERWGLSFGEHRREGQQGYDTSRLIVGEWPVK
TERPCSQKKIRVLCVCVFVFVSHCAVRSPGRRTGAASTSAVGFEETERLL
DESEWATGASSWRLGAATAPPTRDEDQIECAAAASSELLSLNLDMLEKCL
RRSAVHERLRLSHTYTAELEVDIREDPALEAAPASLSPARKGGGVEAAMV
ARLGGGGGRRGAGEQVGAEVGAPSTARGGGGASVDVDGGGGGGGGGGGGA
ANATVEGDEDGVLDALLGLPAGGGGGGGGGGGSSRAGDPGLATPSAGRAA
LEASLSPTSLPPGDGTTAMSASSGKHGHGHGDGDGGGGDGRGGGGAPTEP
AGGAAGSRGGRGAAAATVSASRFGTGAGADGAGGGGADDLEDWLDDMLAD
A*
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