prot_L-elsbetiae_contig797.16936.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig797.16936.1
Unique Nameprot_L-elsbetiae_contig797.16936.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length351
Homology
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BLAST of mRNA_L-elsbetiae_contig797.16936.1 vs. uniprot
Match: D8LKQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ1_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 3.780e-80
Identity = 210/368 (57.07%), Postives = 232/368 (63.04%), Query Frame = 0 
Query:    1 MAGHHVVLVCLKKNNEGEELTNLPRSMRAGQGGGDELRGWEAPALGRIGIKYVRSRDDLAWYLASLHTLKRNKWPTAIAGKRTPRANFPSMVVPLFMDDLDKIIETSAGXXXXXXXXXXXXXXXXXXXXXXXXXALLQDTAEFFDKSKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----TSAYQPLPSGNLEV-GGAG--FAGTPGAAGRREGGRLVVGGGQGE-----AAVRVVSTCSMSDRGMLSLYGRFVHAVAKVQNTTGPDCFSLRLDHSIGTAPHPHTCPLPRPAVSQGPSDSNRGFAAGFAPLDDGRDSSSDGSGRVAQQV------EVVDFVRSQLDGSFAVF 350
            +AGH VVLVCLK  N+ E+L+NLPRSMRAG G  DELRGWEA ALGRIGIKYVRSRDDLAWYLASLHTLK+++WPT IA                 +DD+DKIIETSAGXXXXXXXXXXXXXXX          ALLQDTAEFFDKS+A       XX            XXXXXXXXXXXXXX            TS+ Q  PSGNL V GG G  FA TPG   R   G    GGG+ +     AAVRVV+TCS SDRGMLSLYGRFVH VA+VQNTTGPDCFSLR+D  IGTA  P     PRPA + G    + GFA GF P D                       EVV++VRSQ+DGSFA+F
Sbjct:  141 VAGHRVVLVCLKTANDSEDLSNLPRSMRAG-GESDELRGWEAIALGRIGIKYVRSRDDLAWYLASLHTLKKSQWPTVIA-----------------VDDVDKIIETSAGXXXXXXXXXXXXXXXLRIL------ALLQDTAEFFDKSRAEAAATAAXXARGSTAGSTPNRXXXXXXXXXXXXXXQPAERGSGGGGNTSSPQSQPSGNLRVVGGEGERFAWTPGEGSRAADGARPKGGGRDDITGEAAAVRVVTTCSTSDRGMLSLYGRFVHVVARVQNTTGPDCFSLRVDPGIGTASAPAPYLRPRPAAASG----SGGFAPGFTPWDGXXXXXXXXXXXXXXXXXXXXHQEVVEYVRSQIDGSFALF 480
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BLAST of mRNA_L-elsbetiae_contig797.16936.1 vs. uniprot
Match: A0A6H5LPQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPQ2_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 3.940e-7
Identity = 74/134 (55.22%), Postives = 78/134 (58.21%), Query Frame = 0 
Query:  135 ALLQDTAEFFDKSKA----GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAYQPLPSGNLE-VGGAG--FAGTPGAAGRREGGRLVVGGG----QGEAA-VRVVSTCSMSDRGMLSLYGR 256
            ALLQDTAEFFDKS+A     XXXX              XXXXXXXXXXXXX           TS+ Q  PSG+L  VGG G  FA TPG   R   G    GGG     GEAA VRVVSTCS SDRGML+LYGR
Sbjct:   32 ALLQDTAEFFDKSRAEAXXXXXXXARGSTAEGTPNRTTXXXXXXXXXXXXXPADRGSGSGGNTSSPQSQPSGSLRIVGGEGERFAWTPGEGSRAAEGARPKGGGCDDVTGEAAAVRVVSTCSTSDRGMLALYGR 165
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig797.16936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKQ1_ECTSI3.780e-8057.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LPQ2_9PHAE3.940e-755.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig797contigL-elsbetiae_contig797:2123..4863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig797.16936.1mRNA_L-elsbetiae_contig797.16936.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig797 1215..5218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig797.16936.1 ID=prot_L-elsbetiae_contig797.16936.1|Name=mRNA_L-elsbetiae_contig797.16936.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=351bp
MAGHHVVLVCLKKNNEGEELTNLPRSMRAGQGGGDELRGWEAPALGRIGI
KYVRSRDDLAWYLASLHTLKRNKWPTAIAGKRTPRANFPSMVVPLFMDDL
DKIIETSAGGSGGGGGGSGGGGGGGIGAAALRILALLQDTAEFFDKSKAG
ALSAAAAASASDSTVGGSPTTTTGAALTPQQAMESASGGGGGTSAYQPLP
SGNLEVGGAGFAGTPGAAGRREGGRLVVGGGQGEAAVRVVSTCSMSDRGM
LSLYGRFVHAVAKVQNTTGPDCFSLRLDHSIGTAPHPHTCPLPRPAVSQG
PSDSNRGFAAGFAPLDDGRDSSSDGSGRVAQQVEVVDFVRSQLDGSFAVF
*
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