prot_L-elsbetiae_contig7965.16934.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7965.16934.1
Unique Nameprot_L-elsbetiae_contig7965.16934.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length673
Homology
BLAST of mRNA_L-elsbetiae_contig7965.16934.1 vs. uniprot
Match: D7G7K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K0_ECTSI)

HSP 1 Score: 521 bits (1342), Expect = 3.900e-160
Identity = 353/627 (56.30%), Postives = 393/627 (62.68%), Query Frame = 0
Query:    1 RILRVSRFAVLQMVSADNTGGDRQAGXXXXXXXAGSLPGSRVVDILAEGVEGNWTPATHLKIIKPVREVTLSIWKAMLHLRRAWLPAPPQPGXXXXXXXXXXXXXXXXXXDRSPPWDDPVALAYWVRAWVAGGPSGPSGDTLHRLHARDVSIRGRWPVQPGLHAAGNGTGTGAAFPASPPLSXXXXXXXXXXXXXXXXAPRSVLFPAAEEYGIRMGVRVGVFTSESVGEHFKFLDTAVDLDGDNLASISSLSLTRTLGDACAVNPRPRRTLPAAXXXXXXXXXXXXXXXXXXDPASA-----GESEAVVPSCRPPTEPSERRIIGACFYELKARAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSRESEAAGC-----EGLG-GTAGAGKHGXXXXXXXXXXXXXXXXXXXXXXXXDAPEARISGTGSGTGISAAASDTTSTRSTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALEPWLLPLVTRPAGFLVEVEGAVVRAGPGKALGRRLDSLALQTKALALALSEMPGRWHPLAGGPCGDFHRLFWKPPVPEEAFLPSSARPQDRQGRGAWGNHLWLRARGVAIEVVDEPLEAWFEAMHPVWARHLAARVFRRAL 616
            R LRVS+FAVLQM SAD     R AG           P SRVVDILAEGV+G+WTPATHLKIIKPVREVTLSIWKAMLHLRRAWL                         DR PPWDDP AL YWVRAWVAGGPSGP+GDTLHRLHARDVS++ RWPVQP   AA        A P++         XXXXXXX    AP ++ FP AEEYG+RM V V  F SESVGEHFKFL TAVDLDGD LASIS+ S++RTLGD C ++P      P+                     AS      G ++  VPS   PTEPSERRI+GACF+ELKARAMA  XXXXXXXXXXXXXXXXXXXXXX      R S          +G G G AG G                                R S  G G G +AA + +++T+S+ G+                                  ALEPWLLPLVTRPAGFLVEVEGAVVRAG G+ALG RLDSLALQTKALA+ALSEMPGRWHPL GGPC DFHR+FWKPP+PEEAF+ SSARPQDRQG  AWG H+WLRARG+A+E+ DEPLEAWFEAMHPVW+R LAARVFRRAL
Sbjct: 1269 RFLRVSKFAVLQMFSADR----RPAGR----------PASRVVDILAEGVDGHWTPATHLKIIKPVREVTLSIWKAMLHLRRAWLAH-----LSLSRGGSGGDASSVLGGDRCPPWDDPAALEYWVRAWVAGGPSGPAGDTLHRLHARDVSLKARWPVQPQSPAAHEHA---TASPSA---------XXXXXXXAKRKAPGTI-FPDAEEYGVRMSVGVDEFLSESVGEHFKFLRTAVDLDGDCLASISTFSISRTLGDTC-ISPATAPRGPSGETSRDDTGGAPGGAGPAAATASGLRGEEGATKHEVPSFYLPTEPSERRIVGACFHELKARAMAVAXXXXXXXXXXXXXXXXXXXXXXCTNQTPRPSXXXXXXXXXXDGAGVGDAGGGDS-------------WSREWTAGTAAGARSSTRRSPVGDG-GRTAAVNASSATQSSAGAGGQSVGSGDPPGGGRNNRGAVVGTTR--------ALEPWLLPLVTRPAGFLVEVEGAVVRAGHGRALGNRLDSLALQTKALAVALSEMPGRWHPLRGGPCDDFHRMFWKPPIPEEAFVASSARPQDRQG--AWGVHVWLRARGLALEIADEPLEAWFEAMHPVWSRQLAARVFRRAL 1838          
BLAST of mRNA_L-elsbetiae_contig7965.16934.1 vs. uniprot
Match: A0A6H5KIC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIC1_9PHAE)

HSP 1 Score: 400 bits (1027), Expect = 2.690e-118
Identity = 331/640 (51.72%), Postives = 367/640 (57.34%), Query Frame = 0
Query:    1 RILRVSRFAVLQMVSADNTGGDRQAGXXXXXXXAGSLPGSRVVDILAEGVEGNWTPATHLKIIKPVREVTLSIWKAMLHLRRAWLPAPPQPGXXXXXXXXXXXXXXXXXXDRSPPWDDPVALAYWVRAWVAGGPSGPSGDTLHRLHARDVSIRGRWPVQPGLHAAG-NGTGTGAAFPASPPLSXXXXXXXXXXXXXXXXAPRSVLFPAAEEYGIRMGVRVGVFTSESVGEHF-----------------KFLDTAVDLDGDNLASISSLSLTRTLGDACAVNP---RPRRTLPAAXXXXXXXXXXXXXXXXXXDPASAGESEAV---VPSCRPPTEPSERRIIGACFYELKARAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSRESEAAGCEGLGGTAGAGKHGXXXXXXXXXXXXXXXXXXXXXXXXDAPEARISGTGSGTGISAAASDTTSTRSTHGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALEPWLLPLVTRPAGFLVEVEGAVVRAGPGKALGRRLDSLALQTKALALALSEMPGRWHPLAGGPCGDFHRLFWKPPVPEEAFLPSSARPQDRQGRGAWGNHLWLRARGVAIEVVDEPLEAWFEAMHPVWARHLAARVFRRAL 616
            R LRVS+FAVLQM S+D     RQAG        GS   SRVVDILAEGV+G+WTP+ HLKIIKPVREVTLSIWKAMLHLRRAWL  P                      DR PPWDDP AL YWVRAW AGGPSGP+GDTLHRLHAR+V ++  WPVQP    A  + T + +A P      XXXXXXXXXXXXX    P ++ FP AEEYG+RM + V  F SESVGEHF                 +FL TAVDLD D LASIS+ S++RTLGD C ++P   RP  T  A+                   P   GE  A    VPS  PPTEPSERRI+GACF+ELKAR MA  XXXXXXXXXXXXXXXXXXXXXXXXXX          +G           XXXXXXXXXXXXX           +   A +S T SG   + A      +R   G                                   ALEPWLLPLVTRPAGFLVEVEGAVVRAG  +ALG+RLDSLALQTKALA+ALSEMPGR                                        AWG H+WLRARGVA E+ DEPLEAWFEAMHPVW+R LAARVFRRAL
Sbjct: 1444 RFLRVSKFAVLQMFSSD-----RQAG-------GGSA--SRVVDILAEGVDGHWTPSIHLKIIKPVREVTLSIWKAMLHLRRAWLAQP-----SLSRGGSGDNASSVVGGDRCPPWDDPAALEYWVRAWAAGGPSGPAGDTLHRLHARNVLLKALWPVQPQSPTAHEHATASPSAAPGXXXXXXXXXXXXXXXXXXKKKVPGTI-FPHAEEYGVRMSIGVDEFLSESVGEHFNGCVEVSAPCLPLLRRSRFLRTAVDLDDDRLASISTFSISRTLGDTC-ISPTAARPGSTEEASRDDTGGAPGGAGPAAATA-PGLRGEEGATKHEVPSFYPPTEPSERRIVGACFHELKARVMAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--DGASAGDAXXXXXXXXXXXXXXXXXXGTPTRRSPVCEEGRTASVS-TSSGQSSAGAGGQFAGSRDPPGGGRNNRGAMSRTTR---------------------ALEPWLLPLVTRPAGFLVEVEGAVVRAGHRRALGKRLDSLALQTKALAVALSEMPGR----------------------------------------AWGVHVWLRARGVAFEIADEPLEAWFEAMHPVWSRQLAARVFRRAL 1997          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7965.16934.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7K0_ECTSI3.900e-16056.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KIC1_9PHAE2.690e-11851.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23148:SF2coord: 426..666
NoneNo IPR availablePANTHERPTHR23148SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEINcoord: 426..666

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7965contigL-elsbetiae_contig7965:130..9071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7965.16934.1mRNA_L-elsbetiae_contig7965.16934.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7965 130..9071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7965.16934.1 ID=prot_L-elsbetiae_contig7965.16934.1|Name=mRNA_L-elsbetiae_contig7965.16934.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=673bp
RILRVSRFAVLQMVSADNTGGDRQAGGGGGGGGAGSLPGSRVVDILAEGV
EGNWTPATHLKIIKPVREVTLSIWKAMLHLRRAWLPAPPQPGGGGGGGSH
RVSCPPGGGGDRSPPWDDPVALAYWVRAWVAGGPSGPSGDTLHRLHARDV
SIRGRWPVQPGLHAAGNGTGTGAAFPASPPLSSSSSSSSSSSLSSAAAAP
RSVLFPAAEEYGIRMGVRVGVFTSESVGEHFKFLDTAVDLDGDNLASISS
LSLTRTLGDACAVNPRPRRTLPAAATAAAAAAAAAAAAAASSDPASAGES
EAVVPSCRPPTEPSERRIIGACFYELKARAMAVAASAAASSSGPGDEEEE
EERPGQQQQQPSRESEAAGCEGLGGTAGAGKHGGSAGSGGGTTAAAAADR
VAAAAAADAPEARISGTGSGTGISAAASDTTSTRSTHGSSGGGTEGGGAA
SVGRGDGGGGGSMKGGGGGVVVAALEPWLLPLVTRPAGFLVEVEGAVVRA
GPGKALGRRLDSLALQTKALALALSEMPGRWHPLAGGPCGDFHRLFWKPP
VPEEAFLPSSARPQDRQGRGAWGNHLWLRARGVAIEVVDEPLEAWFEAMH
PVWARHLAARVFRRALRKRVGRSGGGGGGGGGGSDGGGQGMARGGDAQAA
AAAAAAAAAVAAAEREGNEEDAR
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