prot_L-elsbetiae_contig788.16831.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig788.16831.1
Unique Nameprot_L-elsbetiae_contig788.16831.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length177
Homology
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BLAST of mRNA_L-elsbetiae_contig788.16831.1 vs. uniprot
Match: A0A6H5KYI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI3_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 1.940e-52
Identity = 101/137 (73.72%), Postives = 115/137 (83.94%), Query Frame = 0 
Query:   41 SNMITMSVQERPSSRGNFLSGAAAALAAAGGLGVAAGGFG-SAAVADQLGDLDGGAPVSMGAAAIKVTDGEPLSDEAARIQRKLATQAKLNGKTSSGQMTYTESRAAEEEKQQRMKEERNDKAKRRAAMCENLGRGC 176
            ++M+ MS QE PS+RG+FLS AA  +AAA GLGV  GG    AAVADQLGDLDGGAP  MG   +K+T+GEPLS+EAARIQRKLA QAKLNGK+SSGQMTY ESRAAE EKQQR+K+E NDKA+RRAAMCENLGRGC
Sbjct:   45 NDMLRMSPQEGPSNRGDFLSSAAGTIAAAAGLGVVTGGLKPGAAVADQLGDLDGGAPTPMGG--VKLTEGEPLSEEAARIQRKLAAQAKLNGKSSSGQMTYGESRAAEGEKQQRLKDEANDKARRRAAMCENLGRGC 179
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BLAST of mRNA_L-elsbetiae_contig788.16831.1 vs. uniprot
Match: D7FUR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR4_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 1.000e-32
Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = 0 
Query:  103 AIKVTDGEPLSDEAARIQRKLATQAKLNGKTSSGQMTYTESRAAEEEKQQRMKEERNDKAKRRAAMCENLGRGC 176
            A+K+T+GEPLS+EAARIQRKLA QAKLNGKTSSGQMTY ESRAAE EKQQR+K+E NDKA+RRAAMCENLGRGC
Sbjct:    3 AVKLTEGEPLSEEAARIQRKLAAQAKLNGKTSSGQMTYGESRAAEGEKQQRLKDEANDKARRRAAMCENLGRGC 76
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig788.16831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYI3_9PHAE1.940e-5273.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUR4_ECTSI1.000e-3285.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..165
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..176
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.718
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig788contigL-elsbetiae_contig788:10652..15643 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig788.16831.1mRNA_L-elsbetiae_contig788.16831.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig788 9373..15681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig788.16831.1 ID=prot_L-elsbetiae_contig788.16831.1|Name=mRNA_L-elsbetiae_contig788.16831.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=177bp
MKYINVASPALALLCAAGPAAAFVSVAPPSRGVATAASPNSNMITMSVQE
RPSSRGNFLSGAAAALAAAGGLGVAAGGFGSAAVADQLGDLDGGAPVSMG
AAAIKVTDGEPLSDEAARIQRKLATQAKLNGKTSSGQMTYTESRAAEEEK
QQRMKEERNDKAKRRAAMCENLGRGC*
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