prot_L-elsbetiae_contig7865.16818.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7865.16818.1
Unique Nameprot_L-elsbetiae_contig7865.16818.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length65
Homology
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BLAST of mRNA_L-elsbetiae_contig7865.16818.1 vs. uniprot
Match: D7G2B2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B2_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 1.000e-14
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0 
Query:   29 RFVDPQSTLRDGYCDGGSCKVNGTPFPSSFAGKLSI 64
            R VDP STLRDGYCDGG+CKVNG PFPS FAGKLS+
Sbjct:   56 RVVDPLSTLRDGYCDGGACKVNGKPFPSRFAGKLSV 91
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7865.16818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2B2_ECTSI1.000e-1483.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..64
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7865contigL-elsbetiae_contig7865:148..342 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7865.16818.1mRNA_L-elsbetiae_contig7865.16818.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7865 148..342 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7865.16818.1 ID=prot_L-elsbetiae_contig7865.16818.1|Name=mRNA_L-elsbetiae_contig7865.16818.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=65bp
MFLSLCLLLGGNCDFTSCHSPECRGGGCRFVDPQSTLRDGYCDGGSCKVN
GTPFPSSFAGKLSI*
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