prot_L-elsbetiae_contig7863.16815.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7863.16815.1
Unique Nameprot_L-elsbetiae_contig7863.16815.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length75
Homology
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BLAST of mRNA_L-elsbetiae_contig7863.16815.1 vs. uniprot
Match: A0A6H5LFG5_9PHAE (Ribonuclease Z n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFG5_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 3.270e-14
Identity = 32/54 (59.26%), Postives = 42/54 (77.78%), Query Frame = 0 
Query:    2 TLHGPPGLLEFFRATRHFMHPGDFSLAFEAVETASTLRHSEMNVSQVPITKAKH 55
            TLHGPPGL EF+ ATRHF+H  DF + FEAVE  +T RHSEM++ Q+PI + ++
Sbjct:  129 TLHGPPGLSEFYHATRHFIHRADFPVGFEAVEEETTFRHSEMSIRQIPIKRQQN 182
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7863.16815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LFG5_9PHAE3.270e-1459.26Ribonuclease Z n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7863contigL-elsbetiae_contig7863:2323..3832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7863.16815.1mRNA_L-elsbetiae_contig7863.16815.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7863 2323..3859 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7863.16815.1 ID=prot_L-elsbetiae_contig7863.16815.1|Name=mRNA_L-elsbetiae_contig7863.16815.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=75bp
MTLHGPPGLLEFFRATRHFMHPGDFSLAFEAVETASTLRHSEMNVSQVPI
TKAKHPAVENKARSGGPAECGVPAS
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