prot_L-elsbetiae_contig7844.16803.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7844.16803.1
Unique Nameprot_L-elsbetiae_contig7844.16803.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length556
Homology
BLAST of mRNA_L-elsbetiae_contig7844.16803.1 vs. uniprot
Match: D8LG64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG64_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 5.940e-60
Identity = 139/370 (37.57%), Postives = 180/370 (48.65%), Query Frame = 0
Query:   43 LLDDETSRVVLSHLPATHLGGSALVSKAWETLSSKDDLWHPFLSKTDPMSALGEERLRVMSLQYSCKQVVLELSTRLCSCCREPTNGFFVLTCSRVCLSCFETDPSVKMSSVSYARSHYLLSKSQEAQLPTLRVEKAEETGLIGTNDSAITVTTISAAKASAVNRWGSEEAFENEMSTRRAKAEASYEARKQAFN-DQSRGAADGLSDSPPQFSQGSSKHQAPP-------KPRRHPSCPRILGLGNETNYVGINQQGHHAVCGEKYGFFTVVNDAYFDRGPTVVIT-------------------DDDPESYETD--------DMYDMWDEYGSAGGYVAWSEESSPEAHHGRKLAEALKTAKHGTTIE 377
            +LDD  +  +L++LP + LG S L+SKAW   +  + LW PFLS  DP+S LG  +L  ++ Q++C+QVV +LS RLCS CREPT+GFF LTCSRVC SCFETD    M S+                                                    RWGSEE F+ EM+ R+ KAEA++ AR  A+   Q +  A   S S     +  S   +PP       KP+R+PS PRI  L  ETNYV  NQQ  H V GEKYGF+ +VNDA+FD GPT+ I+                   DDD +    D        + Y  +     +  Y  W  +       GR   EALKTAK GTTI+
Sbjct:    1 MLDDAVAGDILAYLPCSDLGASNLISKAWLAPNKNESLWRPFLSTVDPISILGPAKLSELAEQFTCRQVVTQLSLRLCSLCREPTSGFFTLTCSRVCESCFETDARATMCSL----------------------------------------------------RWGSEEGFQAEMTARKVKAEAAHRARVAAYEITQQQSTAKSPSLSREGGGEEDSTSTSPPAEPSPLEKPKRYPSTPRICRLSRETNYVASNQQEGHGVRGEKYGFYRIVNDAFFDAGPTIAISCATSSPSPHGPNTSTNTSNDDDLDENVCDVTCSACSSNSYARFHTMTESESYCPWDVQGYERERRGRVFVEALKTAKDGTTIK 318          
BLAST of mRNA_L-elsbetiae_contig7844.16803.1 vs. uniprot
Match: D8LG65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG65_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 1.430e-53
Identity = 139/373 (37.27%), Postives = 192/373 (51.47%), Query Frame = 0
Query:   43 LLDDETSRVVLSHLPATHLGGSALVSKAWETLSSKDDLWHPFLSKTDPMSALGEERLRVMSLQYSCKQVVLELSTRLCSCCREPTNGFFVLTCSRVCLSCFETDPSVKMSSVSYARSHYLLSKSQEAQLPTLRVEKAEETGLIGT-----NDSAITVTTISAAKASAVNRWGSEEAFENEMSTRRAKAEASYEARKQAFNDQSRGAADGLSDSPPQFSQGSS---KHQAPPKPRRH----PSCPRILGLGNETNYVGINQQGHHAVCGEKYGFFTV-------------VNDAYFDRGP---TVVITDDDPESYE--------TDDMYDMWDEYGSAGGYVAWSEESSPEAHHGRKLAEALKTAKHGTTIEIT 379
            +LDD  +  +L++LP + LG S L+SKAW   +  + LW PFLS  DP+S LG  +L  ++ Q++C+QVV +LS  L S CR+PT+GFF +TCSRVC  CF TD  VKM S+S+A+ H+LLS SQ A+LPTL V+KA ETGL G      N  +IT TT SA K+SA+ RWGSEE F+ EMS R+ KAEA++ AR  A+       A G +   P+   G     +H  P    R     P+ P +      T  +   +        E     T+             +  A    GP   T    +DD +           + + Y  +     +  Y  W  +       GR   EALKTAK GTTI+++
Sbjct:    1 MLDDAVAGDILAYLPYSDLGVSNLISKAWLAPNENESLWRPFLSTVDPISILGPAKLSELAEQFTCRQVVTQLSLPLRSLCRDPTSGFFTVTCSRVCEPCFGTDTRVKMCSLSFAKHHFLLSSSQAARLPTLHVDKAYETGLPGVERFSHNKRSITRTTCSAGKSSALARWGSEEVFQAEMSARKGKAEAAHRARVAAYEAAQESMA-GRAPPLPETPSGKKIRHRHHLPLSHLRSRNQSPTRPPLAFAALATKRISWERTSKSTTASEARSMGTIRLSTTPSSTLVRRLLSAPNPHGPDTSTNTSNNDDLDENVCGASCNSCSSNSYARFHTMTESESYCPWDVQGYERERRGRAFVEALKTAKEGTTIKVS 372          
BLAST of mRNA_L-elsbetiae_contig7844.16803.1 vs. uniprot
Match: A0A835ZL97_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL97_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 8.690e-18
Identity = 79/222 (35.59%), Postives = 109/222 (49.10%), Query Frame = 0
Query:  120 CSCCREPTNGFFVLTCSRVCLSCFETDPSVKMSSVSYA--------RSHYLLSKSQEAQLPTLRVEKAEETGLIGTNDSAITVTTISAAKASAVNRWGSEE------------------AFENEMSTRRAKAEASYEARKQAFN-----DQSRGAADGLSDSPPQFSQGSSKHQAPPKPRRHPSCPRILGLGNETNYVGINQQGHHAVCGEKYGFFTVVNDA 310
            C  C   T       C+R C +CF   P+ K+ SVSY         ++H+LLS SQEA+L TL V +A E+G +    +++ +T +  A+ SA+ R+GSEE                  AF+ EM+ RR+KA+  ++AR +A        ++RG A  +  SP                    S PRILGL NETNYVG NQ   H V G KYG   V +DA
Sbjct:  785 CVACGVRTGWISYCACARTCAACFRA-PTAKLCSVSYTXXXXXXXXKAHFLLSASQEAELVTLVVPEAAESGCVANRKASLPITHLGRARDSAIRRFGSEEGIMHLSRAXXXXXXXXXXAFDAEMTRRRSKAQDGHDARYRAAQVATTEARARGDASAVIKSP--------------------SSPRILGLANETNYVGANQASGH-VYGAKYGHVFVSDDA 984          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7844.16803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LG64_ECTSI5.940e-6037.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LG65_ECTSI1.430e-5337.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZL97_9STRA8.690e-1835.59Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1280.50coord: 34..124
e-value: 2.0E-5
score: 26.4
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 41..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7844contigL-elsbetiae_contig7844:3978..8808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7844.16803.1mRNA_L-elsbetiae_contig7844.16803.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7844 3960..9261 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7844.16803.1 ID=prot_L-elsbetiae_contig7844.16803.1|Name=mRNA_L-elsbetiae_contig7844.16803.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=556bp
MATRASTRSTRGRSSKLGALDQSRSTSRRKRPVVAASAGVFPLLDDETSR
VVLSHLPATHLGGSALVSKAWETLSSKDDLWHPFLSKTDPMSALGEERLR
VMSLQYSCKQVVLELSTRLCSCCREPTNGFFVLTCSRVCLSCFETDPSVK
MSSVSYARSHYLLSKSQEAQLPTLRVEKAEETGLIGTNDSAITVTTISAA
KASAVNRWGSEEAFENEMSTRRAKAEASYEARKQAFNDQSRGAADGLSDS
PPQFSQGSSKHQAPPKPRRHPSCPRILGLGNETNYVGINQQGHHAVCGEK
YGFFTVVNDAYFDRGPTVVITDDDPESYETDDMYDMWDEYGSAGGYVAWS
EESSPEAHHGRKLAEALKTAKHGTTIEITACCCSPTSGLIIDTSVRLGGK
YIRTWNAPLVIRAPSIVRDLEVLHDFPLMTQDDSPGSPAVDGCDPSVEIL
NDALVEECRVVSREDTQGCNVRLQVGRLVANGNTFMGGLCGVTVAPVIGR
TTTVHLEGNIFSDGGCGLQKGPPYCHLAQDTAATLAANTFHGISSEDRIH
ENRNG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf