prot_L-elsbetiae_contig7840.16801.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7840.16801.1
Unique Nameprot_L-elsbetiae_contig7840.16801.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length163
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig7840.16801.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 8.280e-8
Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 0 
Query:   18 MTKKCGHPGCFKRSSYGIDGSKEPELCPGHAVNGMV 53
            ++K+CGHPGC KR SYG DGSK+ ELC  HA+ GMV
Sbjct:    5 VSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGMV 40
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7840.16801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI8.280e-866.67EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7840contigL-elsbetiae_contig7840:5379..5867 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7840.16801.1mRNA_L-elsbetiae_contig7840.16801.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7840 5379..5868 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7840.16801.1 ID=prot_L-elsbetiae_contig7840.16801.1|Name=mRNA_L-elsbetiae_contig7840.16801.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=163bp
EEYCRVSKRFENTRRVRMTKKCGHPGCFKRSSYGIDGSKEPELCPGHAVN
GMVSVKQQRRCAHPDCTKQPSHGTEGSGKSEFCAGHAKAGMINISTKRCD
HLGCRKYPSFGMPGSGKRETCAEHTREGMVNVARVKKCGGAGCSTRASFG
AAGSKKVEFCAKH
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