prot_L-elsbetiae_contig784.16798.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig784.16798.1
Unique Nameprot_L-elsbetiae_contig784.16798.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length453
Homology
BLAST of mRNA_L-elsbetiae_contig784.16798.1 vs. uniprot
Match: D8LRF8_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF8_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 8.820e-98
Identity = 238/393 (60.56%), Postives = 291/393 (74.05%), Query Frame = 0
Query:   67 VSVSTDAQLASLLRATNCSEGEFVVSWEGELVFSEPIVVGNSTTVSVTGVGGGAVLDGGGVSRLFEMSAGASLLLENLGLRNGQAPDFTGGGGAIVADGEGLNLAATSCTFTNNSSPRDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKADSAAAVSATTTMFLGNRADGGGS-----DEGKGGAIYLAGGAPQLAFHDCELRSNNASDTGGAVFFEAGGGITVNATRFEGNGARYSAGGIFAGGEIAEVTVVDAVFASNFVSDIANWNKEF-YVGGALNVFGEARVAVSSSVFSGNGAHLXXXXXXXXXXXXXXXXXXXXXXXXXXEGGAVVVSGFGGIGRFDATFTDTVFNRNWCGGNGGALSAYSGGPGNVTLLRTNFSGNAVAYRD 453
            ++VST AQLA+L+ +TNCS+G FVVSW+G L  SEP+VVGNSTT+S+ GVG G+VLDGGG SRLF++S GASL L+NL LRNG AP + GGG AI ADGE ++L  +SC FT N +P D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      AV+A  T+FL N A+G  S     D G GGA+ L+GG PQLAFH+CELR NNA+  GGAV+ +AG  +T+N+T  +GN A    GG+   G++A+V V+D+VF  NF SD A+W+    +VGGAL VFG+A V++ SS F+GNGA  XXXXXXXXXXXXXXXXXXXXXX    +GG +++      G FD  FTDT F+ NW GGNG  L A+    GN+TLLRTNFS NAVAYR+
Sbjct:    1 MTVSTAAQLATLVESTNCSDGAFVVSWQGALTLSEPVVVGNSTTLSIEGVGDGSVLDGGGGSRLFQVSGGASLFLQNLELRNGSAPYYNGGG-AIYADGEHVSLLVSSCNFTANRAPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTARKTLFLANVAEGPNSAWDNFDVGVGGAVGLSGGTPQLAFHECELRHNNATSYGGAVYSDAGASVTMNSTLLDGNWAGEDGGGVHVKGDVAQVDVLDSVFTGNFASDSASWSSSLSHVGGALYVFGQAAVSIKSSSFTGNGAEGXXXXXXXXXXXXXXXXXXXXXXLGNAQGGGIMIIN---EGPFDVNFTDTAFSDNWSGGNGAGLWAFLTA-GNLTLLRTNFSNNAVAYRE 388          
BLAST of mRNA_L-elsbetiae_contig784.16798.1 vs. uniprot
Match: A0A6H5JUM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUM3_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 3.720e-48
Identity = 130/241 (53.94%), Postives = 168/241 (69.71%), Query Frame = 0
Query:  219 ADSAAAVSATTTMFLGNRADGGGS-----DEGKGGAIYLAGGAPQLAFHDCELRSNNASDTGGAVFFEAGGGITVNATRFEGNGARYSAGGIFAGGEIAEVTVVDAVFASNFVSDIANWNKEF-YVGGALNVFGEARVAVSSSVFSGNGAHLXXXXXXXXXXXXXXXXXXXXXXXXXXEGGAVVVSGFGGIGRFDATFTDTVFNRNWCGGNGGALSAYSGGPGNVTLLRTNFSGNAVAYRD 453
            A +A+AV+A  T+FL N A+G  S     D G GGA+ L+GG PQ+AFH+CELR NNA+D GGAV+ ++G  ITV +T  +GN A    GG++A G +A+V V+D+VF  NF SD+A+W+    + GGAL + G+A V++ SS F+GNGA   XXXXXXXXXXXXXXXXXXXXX    +GG +++      G FD  FTDTV + NW GGNGG L A+    GN+ LLRTNFS NAVAYR+
Sbjct:    2 AITASAVTAQKTLFLSNVAEGPNSGWDDFDVGVGGAVGLSGGTPQVAFHECELRRNNATDNGGAVYSDSGASITVTSTLLDGNWAGGYGGGVYANGGVAQVDVLDSVFTGNFASDMASWSSSVSHAGGALYIVGQAAVSIKSSSFTGNGAEGAXXXXXXXXXXXXXXXXXXXXXLGNAQGGGIMIIN---EGPFDVNFTDTVLSDNWSGGNGGGLWAFLNA-GNLILLRTNFSNNAVAYRE 238          
BLAST of mRNA_L-elsbetiae_contig784.16798.1 vs. uniprot
Match: A0A6H5JWU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU3_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 7.570e-39
Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = 0
Query:   67 VSVSTDAQLASLLRATNCSEGEFVVSWEGELVFSEPIVVGNSTTVSVTGVGGGAVLDGGGVSRLFEMSAGASLLLENLGLRNGQAPDFTGGGGAIVADGEGLNLAATSCTFTNNSSPRD 185
            ++VST AQLA+L+  TNCS G FVVSW+G L  SEP++VGNSTT+SV GVG GAVLDGGG SRLF++S GASL LENL LRN  AP ++GGG AI ADGE ++L  +SC FT N +P D
Sbjct:    1 MNVSTAAQLATLVENTNCSNGAFVVSWQGALTLSEPVLVGNSTTLSVEGVGDGAVLDGGGGSRLFQVSGGASLFLENLELRNASAPYYSGGG-AIYADGEDVSLLVSSCNFTGNRAPLD 118          
BLAST of mRNA_L-elsbetiae_contig784.16798.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.520e-7
Identity = 51/136 (37.50%), Postives = 68/136 (50.00%), Query Frame = 0
Query:   55 AAPPACSPAFAEVS----VSTDAQLASLLRATNCSEGEFVVSWEGELVFSEPIVVGNSTTVSVTGVGGGAVLDGGGVSRLFEMSAGASLLLENLGLRNGQAPDFTGGGGAIVADGEGLNLAATSCTFTNNSSPRDG 186
            AAPP   P  AEV     V   AQ  +L  A NCS G F V W G +V      V + TT+S+TG G  A +DG   +RLF +   A+L L  + + +G +      GGAI A G  L L  T+  F  N++  +G
Sbjct:  136 AAPPTALPCSAEVQQTWVVDDSAQAQALASAVNCSGGSFEVEWRGTVVVESVFYVVDGTTLSITGDGSSAAIDGNAATRLFTV-VNATLHLTGVDVTSGASTT----GGAIAAAGATLTLNQTN--FLRNTATGNG 264          
BLAST of mRNA_L-elsbetiae_contig784.16798.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.010e-6
Identity = 40/125 (32.00%), Postives = 66/125 (52.80%), Query Frame = 0
Query:   60 CSPAFAEVSVSTDAQLASLLRATNCSEGEFVVSWEGELVFSEPIVVGNSTTVSVTGVGG--GAVLDGGGVSRLFEMSAGASLLLENLGLRNGQAPDFTGGGGAIVADGEGLNLAATSCTFTNNSS 182
            CS   +  +V++ A  ASL  +  CS G+F V W+GE+V +  I V   T++++TG  G    ++DG   ++L  +  G++L L N+ L N  +   +  GGAI        +   S +FT NS+
Sbjct:   29 CSAGTSRSTVTSTAGAASLASSLECSNGDFAVEWDGEVVVARTIHVFEGTSLTITGAAGRGSGIMDGNHETQLISLGGGSTLYLTNMTLANANS---SSNGGAIYVGERSRVVLTGSNSFTANSA 150          
BLAST of mRNA_L-elsbetiae_contig784.16798.1 vs. uniprot
Match: UPI0019B83886 (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=UPI0019B83886)

HSP 1 Score: 56.2 bits (134), Expect = 8.880e-5
Identity = 70/180 (38.89%), Postives = 98/180 (54.44%), Query Frame = 0
Query:  121 VLDGGGVSRLFEMSAGASLLLENLGLRNGQAPDFTGG-GGAIVADGEGLNLAATSCTFTNNSSP-RDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKADSAAAVSATTTMFLGNRADGGGSDEGKGGAIYLAGGAPQLAFHDCELRSNNASDTGGAVFFEAGGGITVNATRFEGNGA 298
            +LDGG V+R+F ++AGA L LEN+ ++NG    FT G GG I+ D   L L   +C F +N +    G          XXXXXXXXXXXXXXXXXXXX    +   ++  T+ F  NRAD  G     GG   +       AF D + + ++ ++ GGA++F +     + A+ F GN A
Sbjct:  106 ILDGGTVTRIFRIAAGAELTLENITVQNG----FTAGAGGTILIDSGALTLL--NCNFKDNKAEGTGGAIAMIAPADSXXXXXXXXXXXXXXXXXXXXVHKTTGGTLNILTSRFKDNRADLSGGALAVGGIGTIT----ATAFQDNKAKGDSDNEGGGAIYFSSEATYNIVASGFAGNQA 275          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig784.16798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LRF8_ECTSI8.820e-9860.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JUM3_9PHAE3.720e-4853.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWU3_9PHAE7.570e-3964.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0E9_9PHAE1.520e-737.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JWT9_9PHAE1.010e-632.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0019B838868.880e-538.89Uncharacterized protein n=1 Tax=Armatimonadetes ba... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 47..51
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..51
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 34..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..453
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 65..331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig784contigL-elsbetiae_contig784:2668..10013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig784.16798.1mRNA_L-elsbetiae_contig784.16798.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig784 2667..10013 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig784.16798.1 ID=prot_L-elsbetiae_contig784.16798.1|Name=mRNA_L-elsbetiae_contig784.16798.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=453bp
RPRVRPRPPSSFGSGSGSGSSGGTRSVLSARRRAVATVLTLSAAAVGLAS
AQTAAAPPACSPAFAEVSVSTDAQLASLLRATNCSEGEFVVSWEGELVFS
EPIVVGNSTTVSVTGVGGGAVLDGGGVSRLFEMSAGASLLLENLGLRNGQ
APDFTGGGGAIVADGEGLNLAATSCTFTNNSSPRDGGVILSTGGSAILEF
HDCIFGGNTAKQHGGALKADSAAAVSATTTMFLGNRADGGGSDEGKGGAI
YLAGGAPQLAFHDCELRSNNASDTGGAVFFEAGGGITVNATRFEGNGARY
SAGGIFAGGEIAEVTVVDAVFASNFVSDIANWNKEFYVGGALNVFGEARV
AVSSSVFSGNGAHLGGAAFLRGNHTVTIDGSVFEDNLAFVEGGAVVVSGF
GGIGRFDATFTDTVFNRNWCGGNGGALSAYSGGPGNVTLLRTNFSGNAVA
YRD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence