prot_L-elsbetiae_contig7836.16794.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7836.16794.1
Unique Nameprot_L-elsbetiae_contig7836.16794.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length236
Homology
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BLAST of mRNA_L-elsbetiae_contig7836.16794.1 vs. uniprot
Match: A0A6H5KJB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB8_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 1.040e-12
Identity = 55/128 (42.97%), Postives = 64/128 (50.00%), Query Frame = 0 
Query:   94 ADSSGYLNHSYATGGGLAPSLSPQQAHGNSEGGAA-LSSADADGIDLTLSY-----------GSPAAVGXXXXXXXXXXXXXKKSL-SKTARSIWASRGGVPPCLELFPSNSNSHDGVLASVGESSGD 208
            AD+  Y    YA GGGL  S     AH  +   A  LSS D DGIDL + Y           G+PAA               K  +  ++AR  WASRGGVPP LEL PS+S+ HDG LA V ESS D
Sbjct:  266 ADNGSY----YAGGGGLQSSSLQAHAHAAAAVAAGGLSSFDTDGIDLAVGYADTAAAIDSRSGNPAAAAAAAGCDDHRGGPKKPLVRGRSARRFWASRGGVPPRLELLPSHSHGHDGALADVDESSAD 389
[Close]
BLAST of mRNA_L-elsbetiae_contig7836.16794.1 vs. uniprot
Match: D7G7K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K0_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 5.890e-12
Identity = 61/121 (50.41%), Postives = 68/121 (56.20%), Query Frame = 0 
Query:  105 ATGGGLAPSLSPQQAHGNSEGGAALSSADADGIDLTLSYGSPAAV---------------GXXXXXXXXXXXXXKKSL--SKTARSIWASRGGVPPCLELFPSNSNSHDGVLASVGESSGD 208
            A GGGL    S  QAH ++   A LSS D DGIDL + Y   AA                 XXXXXXXXX    KK L   ++AR  WASRGGVPP LEL PS+S+ HDG LA V ESS D
Sbjct: 2720 ARGGGL--QSSSLQAHAHAAAAAGLSSFDTDGIDLAVGYADTAAAIDSRSGNPAXXXXXXXXXXXXXXXXRGGPKKPLVRGRSARRFWASRGGVPPRLELLPSHSHGHDGALADVDESSAD 2838
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7836.16794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJB8_9PHAE1.040e-1242.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7K0_ECTSI5.890e-1250.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7836contigL-elsbetiae_contig7836:5321..6028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7836.16794.1mRNA_L-elsbetiae_contig7836.16794.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7836 5321..6029 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7836.16794.1 ID=prot_L-elsbetiae_contig7836.16794.1|Name=mRNA_L-elsbetiae_contig7836.16794.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=236bp
ERSLPSRDADVAVAGTAAGDGWAAAEREGGRSSSVGVLHSSGGGGGGGFD
SGAARGVVIIDSSSSGDSDVSDDDSRFGFIGDFDGGGGGGGSHADSSGYL
NHSYATGGGLAPSLSPQQAHGNSEGGAALSSADADGIDLTLSYGSPAAVG
GGGGGGGGGDPDPKKSLSKTARSIWASRGGVPPCLELFPSNSNSHDGVLA
SVGESSGDDEEGKESGGGGGGGGPVGRKTSVSSPKA
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