prot_L-elsbetiae_contig7830.16791.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7830.16791.1
Unique Nameprot_L-elsbetiae_contig7830.16791.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length299
Homology
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BLAST of mRNA_L-elsbetiae_contig7830.16791.1 vs. uniprot
Match: D7G0J2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 2.800e-40
Identity = 88/147 (59.86%), Postives = 103/147 (70.07%), Query Frame = 0 
Query:  121 LQCPKRQVGVRTLGEIREPYQAGARQAYLTHSFLPTQVYYTDNCCGDRSFLQETLEPASVAVEDAANSTCFADEDEA-LPLLDFPNGFNVILLTVSGENCEQSARACVELLRRGREGGPAVLGLDIEWSVRPSGPR-QVATLQLSAR 265
            +Q PKRQVGV +LGEI  P+       YLT  F P QVY+TD CCGD + +Q TL PAS  V D A ST FA+E E  LP L+FP G + IL+ V+ ENCE S+R C++LLRR R   PAVLG DIEWSVRPSGPR QVA +QLSAR
Sbjct:    1 MQRPKRQVGVASLGEIA-PHLKALANRYLTQGFRPIQVYWTDLCCGDGNIIQSTLGPASQHVPDFALSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSAR 146
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7830.16791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0J2_ECTSI2.800e-4059.863'-5' exonuclease domain-containing protein n=1 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7830contigL-elsbetiae_contig7830:1109..2571 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7830.16791.1mRNA_L-elsbetiae_contig7830.16791.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7830 1109..4081 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7830.16791.1 ID=prot_L-elsbetiae_contig7830.16791.1|Name=mRNA_L-elsbetiae_contig7830.16791.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=299bp
MKHFMTLQLRYYTCMDRRRRRGQPSLVPEENQRLRHPPRFSPFDDKAGYN
GRPPSAPVLQAAFLAVIESREHCYHRQQQLVYGKNLGGDDSHKIVKGIRV
MNQKVFHGIHTVLNEWSLVVLQCPKRQVGVRTLGEIREPYQAGARQAYLT
HSFLPTQVYYTDNCCGDRSFLQETLEPASVAVEDAANSTCFADEDEALPL
LDFPNGFNVILLTVSGENCEQSARACVELLRRGREGGPAVLGLDIEWSVR
PSGPRQVATLQLSARSFRCCCCRRRRRRRRKWQQFYGQCRRVRLWGWSG
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