prot_L-elsbetiae_contig783.16787.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig783.16787.1
Unique Nameprot_L-elsbetiae_contig783.16787.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length402
Homology
BLAST of mRNA_L-elsbetiae_contig783.16787.1 vs. uniprot
Match: A0A6H5K364_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K364_9PHAE)

HSP 1 Score: 385 bits (989), Expect = 1.540e-126
Identity = 246/304 (80.92%), Postives = 267/304 (87.83%), Query Frame = 0
Query:    8 GRVAPPPLKRSPPGGPFGASKAVAWHAQQVVQSAVTPMQAMRAVLDRPHRANFVSVSTAVNRVAKLAAARRRGGGLKGEEEPEYLGILLKVTEELVDADLVNARNLAQLLWSVAKLGNPGADDGDVLTHPEEGLREIGPLRFGGGAREKGGAS-LPAESPSQGRLPSLLAGKLSERAMECKPGELAMAAWGLAVLGERDENLLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPEPLQWRGRVSWEWKKGARSSEGRR--------SQGYWKATIDRSWGVKVNGGTPP 302
            GRV+PPPLKR PPGGPFGASKAVAWHAQQVVQSAVTP+QAMRAVLDRP R+N+VSVSTA+NRVAKLAA+RRRGGGLKGEEEP+YLGILLKVTEELVDADLVNARNLAQLLWS+AKLGNP A  G+VL HPEEGL E+GPLRFG GAREKG    +P   P +GRLPSLLAGKLSERAMECKP ELAMAAWGLAVL ERDENLLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  PEPLQWRGRVSWEWK+G +  +  R        + G+WKATIDR+W +++ GG PP
Sbjct:  223 GRVSPPPLKRRPPGGPFGASKAVAWHAQQVVQSAVTPLQAMRAVLDRPLRSNYVSVSTALNRVAKLAASRRRGGGLKGEEEPKYLGILLKVTEELVDADLVNARNLAQLLWSLAKLGNPEASSGEVLEHPEEGLGEVGPLRFGSGAREKGDTPPVPLGPPCEGRLPSLLAGKLSERAMECKPKELAMAAWGLAVLRERDENLLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEPLQWRGRVSWEWKQGKKKKKSGRVGKGHDNWTTGFWKATIDRTWAMRLPGGAPP 526          
BLAST of mRNA_L-elsbetiae_contig783.16787.1 vs. uniprot
Match: D8LMC1_ECTSI (RAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMC1_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 6.710e-44
Identity = 135/179 (75.42%), Postives = 147/179 (82.12%), Query Frame = 0
Query:  132 DVLTHPEEGLREIGPLRFGGGAREKGGAS-LPAESPSQGRLPSLLAGKLSERAMECKPGELAMAAWGLAVLGERDENLLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSPEPLQWRGRVSWEWKKGARSSEGR-------RSQGYWKATIDRSWGVKVNGGTPP 302
            +VL HPE GL E+GPLRFG GAREKG    +P  +P + RLPSLLAGKLSERAMECKP ELAMAAWGLAVLGERDENLLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  PEPLQWRGRVSWEWK G +    R       R+ G+WKATIDR+W +++ GG PP
Sbjct:    2 EVLEHPENGLGEVGPLRFGSGAREKGDTPPVPLGTPGESRLPSLLAGKLSERAMECKPRELAMAAWGLAVLGERDENLLSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEPLQWRGRVSWEWKHGKKKKSRRGGKGHDNRTTGFWKATIDRTWAMRLPGGAPP 180          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig783.16787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K364_9PHAE1.540e-12680.92Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LMC1_ECTSI6.710e-4475.42RAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21228:SF40TRANSFORMING GROWTH FACTOR BETA REGULATOR 4coord: 64..265
NoneNo IPR availablePANTHERPTHR21228FAST LEU-RICH DOMAIN-CONTAININGcoord: 64..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig783contigL-elsbetiae_contig783:11328..20108 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig783.16787.1mRNA_L-elsbetiae_contig783.16787.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig783 11328..20108 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig783.16787.1 ID=prot_L-elsbetiae_contig783.16787.1|Name=mRNA_L-elsbetiae_contig783.16787.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=402bp
ARQQAGGGRVAPPPLKRSPPGGPFGASKAVAWHAQQVVQSAVTPMQAMRA
VLDRPHRANFVSVSTAVNRVAKLAAARRRGGGLKGEEEPEYLGILLKVTE
ELVDADLVNARNLAQLLWSVAKLGNPGADDGDVLTHPEEGLREIGPLRFG
GGAREKGGASLPAESPSQGRLPSLLAGKLSERAMECKPGELAMAAWGLAV
LGERDENLLSAIAEEVSLRADEFEGKELGNIVWAFAVLDYRDKEMLGAVA
EVLSPEPLQWRGRVSWEWKKGARSSEGRRSQGYWKATIDRSWGVKVNGGT
PPPPPRPAAMVMAEKARLLAEKESGGAAAGSAACAAAGAGAGAGADFSGA
ADGPFPSAEGGAVSEVTADALGVSATAGGGGGTVNHQHSAPEGGAVAAGP
AA
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