prot_L-elsbetiae_contig7827.16783.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7827.16783.1
Unique Nameprot_L-elsbetiae_contig7827.16783.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length66
Homology
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BLAST of mRNA_L-elsbetiae_contig7827.16783.1 vs. uniprot
Match: A0A6H5KY88_9PHAE (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KY88_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.070e-14
Identity = 47/74 (63.51%), Postives = 52/74 (70.27%), Query Frame = 0 
Query:    1 MIGPGLASIAQKFLVQLAARTLDRLADSFDDGAQGDDADAGGGIAAAGG-----------QELSSRQRGRFYAD 63
            MIGPG+ASIAQKFLVQLAARTLDRLADSFDD  QG+   AG G   AGG           +E +S +RGRFYAD
Sbjct: 1122 MIGPGVASIAQKFLVQLAARTLDRLADSFDD--QGNKDGAGSGAGGAGGATTVEDVASGVREPASTRRGRFYAD 1193
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7827.16783.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KY88_9PHAE3.070e-1463.51ABC1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7827contigL-elsbetiae_contig7827:5765..6865 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7827.16783.1mRNA_L-elsbetiae_contig7827.16783.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7827 5623..7475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7827.16783.1 ID=prot_L-elsbetiae_contig7827.16783.1|Name=mRNA_L-elsbetiae_contig7827.16783.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=66bp
MIGPGLASIAQKFLVQLAARTLDRLADSFDDGAQGDDADAGGGIAAAGGQ
ELSSRQRGRFYADGQ*
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