prot_L-elsbetiae_contig782.16773.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig782.16773.1
Unique Nameprot_L-elsbetiae_contig782.16773.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length391
Homology
BLAST of mRNA_L-elsbetiae_contig782.16773.1 vs. uniprot
Match: A0A6H5JLC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLC2_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 3.650e-26
Identity = 91/255 (35.69%), Postives = 116/255 (45.49%), Query Frame = 0
Query:   69 SCADGSTIFVISSEFPNLEGCMSEIEVFEGGETEYLNESGLGIVYATVPTGLAEEYWFAQYLDAVTGEQMPACNSEEPSSLAHPADATWIC---TFPDGSVDYGTAATFDVACGCDDDGGSIPTPTPXXXXXPVDS----------CADGSTVFVTSSEFPNLEGCMSEIEVFEGGETEYLNESGLG----IIYSTIPTGL---AEEYWFAQYLDAVT------GEQMPACNSEEPTSLVHPAEATWICTFPDGS 297
            +CA+G+ + V SS FP LEGC+ E+++ EGGE E++ E+G+           AE  W A Y    T     AC S EP +  HP+ ATW C   T  DG V   T  TF V CGCDD          XX    VDS          C++G +  V  S  P  +GC          E  Y    G+G     IYS +PT      E YW+  Y+  +T      GE    C S E    VHPA+ATW+C F   S
Sbjct:   68 TCAEGAGVTVTSSMFPLLEGCLVEMDLIEGGEVEFVGETGVIASELNSDDIDAEYIWVAYY---GTTSLAIACISLEPVTSVHPSTATWYCVDDTTEDGIV-AATDTTFGVDCGCDDXXXXXXXXXXXXPAPNVDSTTPAAPSGSSCSEGESFTVDISALPGADGCYLSTGFTLSDEYVYTQTGGVGGAEMWIYS-LPTSQDADPEIYWYLGYVPEITSSSEVDGEPTIYCGSFEQAGTVHPADATWVCIFASSS 317          
BLAST of mRNA_L-elsbetiae_contig782.16773.1 vs. uniprot
Match: D7G0B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B7_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 8.790e-25
Identity = 90/268 (33.58%), Postives = 120/268 (44.78%), Query Frame = 0
Query:   69 SCADGSTIFVISSEFPNLEGCMSEIEVFEGGETEYLNESGLGIVYATVPTGLAEEYWFAQYLDAVTGEQMPACNSEEPSSLAHPADATWIC---TFPDGSVDYGTAATFDVACGCDDDGGSIPTPTPXXXXXPV----------DSCADGSTVFVTSSEFPNLEGCMSEIEVFEGGETEYLNESGLG---IIYSTIPTGLAEE---YWFAQYLDAVT------GEQMPACNSEEPTSLVHPAEATWICTFPDGSVDYGTATTFGVACG 311
            +CA+GS + V SS FP LEGC+ E ++ EGGE E++ E+G+           AE  W A + +        AC S EP + AHP+ ATW C   T  DG V   T  TF V CGCD           XXXXX             SC++G +  V  S  P  +GC          E  Y    G+G   +   ++P+   ++   YW+  Y+  +T      GE    C S EP   VHPA+A W+CTF   S     A      CG
Sbjct:   68 TCAEGSGVTVTSSMFPLLEGCLVETDLIEGGEAEFVGETGMIAAVLNSDDVDAEYIWAAYHGET---SLTIACFSLEPVTSAHPSTATWYCVDDTTEDGIV-AATDTTFGVDCGCDXXXXXXXXXXXXXXXXXXXXXXXXAPSGSSCSEGESFTVDISALPEADGCYLSTGYTLSDEHVYTQTGGVGGAEMWIHSLPSSDDDDAVIYWYLAYVPEITSSSAFDGELAYYCGSFEPADTVHPADANWVCTFASSSTQTFGADGASFTCG 331          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig782.16773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JLC2_9PHAE3.650e-2635.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0B7_ECTSI8.790e-2533.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 388..390
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 368..387

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig782contigL-elsbetiae_contig782:25037..30540 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig782.16773.1mRNA_L-elsbetiae_contig782.16773.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig782 24837..30540 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig782.16773.1 ID=prot_L-elsbetiae_contig782.16773.1|Name=mRNA_L-elsbetiae_contig782.16773.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=391bp
MPACNSEEPSSLVHPAEATWICTFPDGSVDYGTATTFNVDCGCDGDGGSI
PTPTPPTPTPPSPTPSSGSCADGSTIFVISSEFPNLEGCMSEIEVFEGGE
TEYLNESGLGIVYATVPTGLAEEYWFAQYLDAVTGEQMPACNSEEPSSLA
HPADATWICTFPDGSVDYGTAATFDVACGCDDDGGSIPTPTPPTPTPPVD
SCADGSTVFVTSSEFPNLEGCMSEIEVFEGGETEYLNESGLGIIYSTIPT
GLAEEYWFAQYLDAVTGEQMPACNSEEPTSLVHPAEATWICTFPDGSVDY
GTATTFGVACGCGEDGDIPAPAPPSPTPTPDPVSQPSPVPPLGSVDDDVD
DDVNGDDAITQGNSSGRLFWPAAAAGATGALTLAIVVGGW*
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