prot_L-elsbetiae_contig7810.16761.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7810.16761.1
Unique Nameprot_L-elsbetiae_contig7810.16761.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length125
Homology
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BLAST of mRNA_L-elsbetiae_contig7810.16761.1 vs. uniprot
Match: A0A6H5L2U1_9PHAE (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2U1_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.840e-10
Identity = 38/71 (53.52%), Postives = 48/71 (67.61%), Query Frame = 0 
Query:   58 LRTALFQRRHRECVRILVVIACFAFCRRGRAAIR----KVASPFSFLLWCLGLDRWRHRSAANSLLRGNNN 124
            +R AL +R   +C+RILV++AC A CRRGRAA+     KV SP SFLL C+GL R R R+   +LL GN N
Sbjct:   11 VRLALQRRNGSDCLRILVMLACLACCRRGRAALSLTVCKVTSPVSFLLCCIGLSRRRDRNNG-TLLCGNGN 80
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7810.16761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L2U1_9PHAE4.840e-1053.52BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7810contigL-elsbetiae_contig7810:1663..2862 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7810.16761.1mRNA_L-elsbetiae_contig7810.16761.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7810 1661..2862 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7810.16761.1 ID=prot_L-elsbetiae_contig7810.16761.1|Name=mRNA_L-elsbetiae_contig7810.16761.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp
GDEAQRQVNLVAHTVDTLGWWMKRSVVGTERTHSFSLSDDKREPGRIYIT
TKMLVVPLRTALFQRRHRECVRILVVIACFAFCRRGRAAIRKVASPFSFL
LWCLGLDRWRHRSAANSLLRGNNNS
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