prot_L-elsbetiae_contig780.16752.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig780.16752.1
Unique Nameprot_L-elsbetiae_contig780.16752.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length508
Homology
BLAST of mRNA_L-elsbetiae_contig780.16752.1 vs. uniprot
Match: D7FUD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD4_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 7.490e-72
Identity = 235/571 (41.16%), Postives = 294/571 (51.49%), Query Frame = 0
Query:    1 MRLAYGSDASDGGGSDLSSCIPEFDEARRKKQEVARVLKAARQAKLKANVESATMRRWEKEVLRTIRTEEANALQTPGTS-------TGGRDPELMRALYQLSAEHGCAGENSAPNSTAGKVFEDWESEEGVAQIAAQERGEGVACAQGKPATRASEGSGDGSRQPFQPA----TTVHGDTGAALQQQGHTAEQSG------------EAGTDPGMAGAVVGCGDTA---VASDISEEENREAVEDEQGEDVIKKIVEKLLRTSSSVALAVARPLSIKLPPVLEVKQDPRQAKLASQIRSRQQKRFPPAQCAPSERTFVGGGYRTNHGGSGSGRGGGRCAGTT-----AESSLRTGGD----GICAGNNPTATRSSSCPDL--------------VAAPAGVLDLEAITAAARRVDGSGSGSGVHPQNPAHHHPRNRFAPMAETEVEGFLLQSWKND-YVVTGVGNDGSGGNGGSGWGTSIGC--DAGKTLASLLSRRSSLSPA----------GRQLRFVGTSTG--QDGGRTLTAGSTPTRGVTPRSPRPSSVLEGWAANQAPTTENER 507
            MRLAYG+D SDG GSD++SC PEF+E RR+KQE+AR  +A RQA+LKAN +SA MRRWEKEVLRTIRTE + +L  PGTS         G D EL  AL+QLS EH   G         GK F + E EEG  ++A    G+G A  QG  A R   GS + + Q  QP     +    D     Q +  TA   G               T+P  AGA    G TA     +  + E+  +A E ++G++ I  +VEKLLRTSSSVALAVA+PLSIK PP LEV++DP Q KL S+IRSR+   FPP   A S R FVGGGYRTN            C G          S  TGG     G   G     T S   P++              VA   G+LDLEA+T AA R++G+G G      N   H+PRNRFAPMAE+EV  FL Q   ND Y+ +  GN   GG+        IG   D G T A++                    GR+L  VG STG  +DG RT+   ++    +   S   S+ L+GW  N+  TT N+R
Sbjct:  225 MRLAYGTDLSDGIGSDITSCAPEFEELRREKQEMARAWRAVRQAELKANGDSARMRRWEKEVLRTIRTETSKSLSAPGTSFERENATCSGADQELAHALHQLSVEHAVNGYTQPSPEYGGKNFGNCEEEEGP-EVAPAPGGDGGAGVQGGLAVRG--GSAEATVQLLQPLLVRDSKAETDRTTTQQFERETASAGGVEEARGRGVVGLAGSTNPAAAGAEAE-GTTAGGYTRAPAASEKTSQAEEAKKGDEAITNMVEKLLRTSSSVALAVAKPLSIKRPPALEVEEDPHQVKLVSRIRSRKPT-FPPPPRAKSGRAFVGGGYRTNPSTPSQRVSSSECRGNRFLEQEPFGSYVTGGVVGVVGGVGGRVAAVTVSCLSPNVNGEGRKGSNRRESGVATAGGILDLEAVTEAAGRLNGTG-GHSPSLVNRVPHNPRNRFAPMAESEVARFLQQG--NDRYLSSAAGNGAGGGH------EIIGLNEDHGTTAAAVXXXXXXXXXXXXXXXXXXXIGRRLLVVGESTGRDEDGARTVLVSASENARLFRLS---STPLDGWQTNRTSTTGNKR 778          
BLAST of mRNA_L-elsbetiae_contig780.16752.1 vs. uniprot
Match: A0A6H5KHW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHW7_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 5.300e-35
Identity = 156/381 (40.94%), Postives = 191/381 (50.13%), Query Frame = 0
Query:   55 MRRWEKEVLRTIRTEEANALQTPGTS-------TGGRDPELMRALYQLSAEHGCAGENSAPNSTAGKVFEDWESEEGVAQIAAQERGEGVACAQGKPATRASEGS-----------GDG-------SRQPFQPATTVHGDTGAA-----LQQQGHTAEQSGEAGTDPGMAGAVVGCGDTAVASDISEEENREAVEDEQGEDVIKKIVEKLLRTSSSVALAVARPLSIKLPPVLEVKQDPRQAKLASQIRSRQQKRFPPAQCAPSERTFVGGGYRTNHGGSGSGRGGGRCAGTTAESSLRTGGDGICAGNNPTATRSSSCPDLVAAPAGVLDLEAITAAARRVDGSGSGSGVHPQ--NPAHHHPRNRFAPMAETEVEGFLLQ 403
            MRRWEKEVLRTIR E + +L TPGTS         G D EL RAL+QLS +H   G         GK   + E  +G  ++A    G+G A  QG+PA                  GDG       + Q FQ  T   G   AA     ++  G T  +SG A T+ G A A  GC     AS    EE  +A E E+G++ IK +VEKLLRTSSSVALAVARPLSIK PPVLE ++DP Q                     P E T+V  G   + GG     GGGR A  TA S L    +G+  G   T  R S      A   G+LDL+A+T AA R++G+G  S   P   N   ++PRNRFAPMAE+EV  FL Q
Sbjct:    1 MRRWEKEVLRTIRAETSKSLSTPGTSFERENATRSGGDQELARALHQLSVQHAVDGYTQPSPEYGGKNSGNGEEGKGP-EVAPAPGGDGGAGVQGEPAVCGGSAEATVQLFRPFLVGDGEAETDRTTTQQFQRKTASAGGVEAARGSSVVRLAGST--KSGAARTEVGGATAG-GCTRAPAAS----EEKSQAEEAEKGDEAIKNMVEKLLRTSSSVALAVARPLSIKPPPVLEAEEDPHQE--------------------PFE-TYVPDGSGVDVGG-----GGGRVAAVTA-SCLSPNVNGV--GRKGTNRRESG----EATGGGILDLQAVTEAAGRLNGTGRHS---PSLVNRMPNNPRNRFAPMAESEVARFLKQ 337          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig780.16752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUD4_ECTSI7.490e-7241.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHW7_9PHAE5.300e-3540.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 24..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig780contigL-elsbetiae_contig780:4773..9968 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig780.16752.1mRNA_L-elsbetiae_contig780.16752.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig780 2534..10061 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig780.16752.1 ID=prot_L-elsbetiae_contig780.16752.1|Name=mRNA_L-elsbetiae_contig780.16752.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=508bp
MRLAYGSDASDGGGSDLSSCIPEFDEARRKKQEVARVLKAARQAKLKANV
ESATMRRWEKEVLRTIRTEEANALQTPGTSTGGRDPELMRALYQLSAEHG
CAGENSAPNSTAGKVFEDWESEEGVAQIAAQERGEGVACAQGKPATRASE
GSGDGSRQPFQPATTVHGDTGAALQQQGHTAEQSGEAGTDPGMAGAVVGC
GDTAVASDISEEENREAVEDEQGEDVIKKIVEKLLRTSSSVALAVARPLS
IKLPPVLEVKQDPRQAKLASQIRSRQQKRFPPAQCAPSERTFVGGGYRTN
HGGSGSGRGGGRCAGTTAESSLRTGGDGICAGNNPTATRSSSCPDLVAAP
AGVLDLEAITAAARRVDGSGSGSGVHPQNPAHHHPRNRFAPMAETEVEGF
LLQSWKNDYVVTGVGNDGSGGNGGSGWGTSIGCDAGKTLASLLSRRSSLS
PAGRQLRFVGTSTGQDGGRTLTAGSTPTRGVTPRSPRPSSVLEGWAANQA
PTTENER*
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