prot_L-elsbetiae_contig78.16750.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig78.16750.1
Unique Nameprot_L-elsbetiae_contig78.16750.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length298
Homology
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BLAST of mRNA_L-elsbetiae_contig78.16750.1 vs. uniprot
Match: D7G739_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G739_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 6.850e-60
Identity = 138/259 (53.28%), Postives = 176/259 (67.95%), Query Frame = 0 
Query:    1 MPS-QEDKLTFLGDKVLLIISSLGLVLITAVVFWVARQSA---RAPREE--EEEGVAGLLG-RTRTVPGGREALKAARKEAKKRAKAEFQESSAGKKRRI---RVHERKRPAHVGEEQQHQGGARRENPAELLRKLEKYVLDHKVSSLEALEAELIMPSAEIAVKIEELETRGAFQGIMIDDARGES-GRSFVRVDDDEMRALAAITNQRGRLTVADFAAEANRVLQLSDGGEEATR-----AGRNRPEGQHMLGCEAG 243
            MPS QED+LTFL D ++L+ISS+GL+ +TA V WV RQS    +A R+   E++G AGLLG RTR VPGGREA KAARKE      AEF  SSA +KR++   R  ++++P    + ++ +   R+E  AE LR+L+ Y+LDH+VSSL  LE EL +PS EI  KIEELE RG F GI++DDARG S G SFVRV + EMRALAA  N+RGRLT+A+ AAEANRVL LS+   + TR       R+  EG   +G E G
Sbjct:    1 MPSDQEDQLTFLDDTLILVISSVGLLCVTAAVLWVVRQSPDWQKADRQPAGEQDGDAGLLGGRTRVVPGGREAAKAARKEXXXXXXAEFSRSSAVQKRQVKSKRSAQQQQPRSHADRERTKEEERKERSAEALRRLKSYILDHQVSSLGDLEVELSLPSEEIVDKIEELEARGDFTGILVDDARGSSSGGSFVRVGEGEMRALAAFINERGRLTLAEVAAEANRVLDLSESRIKETRRRIGLGERHFDEGSGGVGGEHG 259
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig78.16750.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G739_ECTSI6.850e-6053.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..297
NoneNo IPR availableTMHMMTMhelixcoord: 15..34
IPR019153DDRGK domain containing proteinSMARTSM01128DDRGK_2coord: 62..216
e-value: 1.7E-4
score: -22.5
IPR019153DDRGK domain containing proteinPFAMPF09756DDRGKcoord: 72..215
e-value: 2.6E-12
score: 46.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig78contigL-elsbetiae_contig78:55357..60661 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig78.16750.1mRNA_L-elsbetiae_contig78.16750.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig78 55057..60742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig78.16750.1 ID=prot_L-elsbetiae_contig78.16750.1|Name=mRNA_L-elsbetiae_contig78.16750.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=298bp
MPSQEDKLTFLGDKVLLIISSLGLVLITAVVFWVARQSARAPREEEEEGV
AGLLGRTRTVPGGREALKAARKEAKKRAKAEFQESSAGKKRRIRVHERKR
PAHVGEEQQHQGGARRENPAELLRKLEKYVLDHKVSSLEALEAELIMPSA
EIAVKIEELETRGAFQGIMIDDARGESGRSFVRVDDDEMRALAAITNQRG
RLTVADFAAEANRVLQLSDGGEEATRAGRNRPEGQHMLGCEAGTEAPSDR
CPKDEEISEFSAIPRRDDDTPVVVRSSLGAESSGRIPHEVGDERTKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019153DDRGK_dom-contain