prot_L-elsbetiae_contig779.16736.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig779.16736.1
Unique Nameprot_L-elsbetiae_contig779.16736.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length508
Homology
BLAST of mRNA_L-elsbetiae_contig779.16736.1 vs. uniprot
Match: A0A6H5KKK5_9PHAE (DUF4211 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK5_9PHAE)

HSP 1 Score: 570 bits (1468), Expect = 1.410e-191
Identity = 297/369 (80.49%), Postives = 316/369 (85.64%), Query Frame = 0
Query:  139 GDASFSHAAFFHEMEQSQDGGVSSLSVGTMTFKEAFLFYVEYIARATQGDGVGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGTWRQDFRDTIMRYPHYGYLNVMGDESHVTDRCSACNRSNRTSVVAFLSGAEYEPNRVWDGLRWDKHLPEHWDNPGAMAISKQARICFRMHRSSKATHFLGDTCKHKSHLFHSLTHYKLYLVSKVAAKINEDDDLEPENFRGEGGPQTSKKKKKRCLNFSENEFESLSSLLTKADDLNGVKWGGRVGVRGGHGKTFLQAGAASSILDWLSGEAPPEQYGDLNLGPGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHVGRGRRWRTVGSSGGRYG 507
            GDA FSHAAFF+EMEQS+DGGVSSLSVGTMTFKEAFLFYVEYIA+ATQGDG GEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCG+WRQDFRDTIMRYPHYGY +V GD   + DRCSACNRSNRTSV+AFLSG+EY+PNRVWDGLRWDKHLPEHWD+P A A++KQ          +KATH+LGDTCKHKSHLFHSLTHYKLYLVSKV+AKI  D  LEPENFRGEGGPQTSKK+KKRCLNFSENEFESLS+LL KADDLNGVKWGGR GVRGGHGKTFL+ GAASSILDWLSGEA   QYG L+LG                   XXXXXXXXXXXXXXX  VGRGRRWRTVGSS GRYG
Sbjct:  630 GDAFFSHAAFFNEMEQSEDGGVSSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLNDRCSACNRSNRTSVIAFLSGSEYDPNRVWDGLRWDKHLPEHWDDPDAAAVAKQ---------EAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKKEKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGGLDLGE------------LEGQGPXXXXXXXXXXXXXXXXDVGRGRRWRTVGSSSGRYG 977          
BLAST of mRNA_L-elsbetiae_contig779.16736.1 vs. uniprot
Match: D7G8T8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T8_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 7.030e-100
Identity = 173/268 (64.55%), Postives = 190/268 (70.90%), Query Frame = 0
Query:  240 IMRYPHYGYLNVMGDESHVTDRCSACNRSNRTSVVAFLSGAEYEPNRVWDGLRWDKHLPEHWDNPGAMAISKQARICFRMHRSSKATHFLGDTCKHKSHLFHSLTHYKLYLVSKVAAKINEDDDLEPENFRGEGGPQTSKKKKKRCLNFSENEFESLSSLLTKADDLNGVKWGGRVGVRGGHGKTFLQAGAASSILDWLSGEAPPEQYGDLNLGPGGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHVGRGRRWRTVGSSGGRYG 507
            I+ Y   G +  +     +   C  C+R     ++ F         +VWDGLRWDKHLPEHWD+P A A++KQ          +KATH+LGDTCKHKSHLFHSLTHYKLYLVSKV+AKI  D  LEPENFRGEGGP TSKKKKKRCLNFSENEFESLS+LL KADDLNGVKWGGR GVRGGHGKTFL+ GAASSILDWLSGEA   QYGDL+LG                       XXXXXXXXXXXFHVGRGRRWRTVGSSGGRYG
Sbjct:   21 ILNYVLTGLVQKLERACLIRSVCLCCSRLT-CPLLPF--------RKVWDGLRWDKHLPEHWDDPDAAAVAKQ---------EAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPHTSKKKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLGD-------------LEGQRAGLGXXXXXXXXXXXFHVGRGRRWRTVGSSGGRYG 257          
BLAST of mRNA_L-elsbetiae_contig779.16736.1 vs. uniprot
Match: D7G8T9_ECTSI (DUF4211 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T9_ECTSI)

HSP 1 Score: 278 bits (710), Expect = 5.430e-81
Identity = 131/148 (88.51%), Postives = 141/148 (95.27%), Query Frame = 0
Query:  140 DASFSHAAFFHEMEQSQDGGVSSLSVGTMTFKEAFLFYVEYIARATQGDGVGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGTWRQDFRDTIMRYPHYGYLNVMGDESHVTDRCSACNRSNRTSVVAFLSGAEYEPNRV 287
            DA FSHAAFF+EMEQS+DGG+SSLSVGTMTFKEAFLFYVEYIA+ATQGDG GEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCG+WRQDFRDTIMRYPHYGY +V GD   +TDRCSACNRSNRTSV+AFLSG+EY+PNRV
Sbjct:  659 DAFFSHAAFFNEMEQSEDGGISSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLTDRCSACNRSNRTSVIAFLSGSEYDPNRV 806          
BLAST of mRNA_L-elsbetiae_contig779.16736.1 vs. uniprot
Match: D7FLB0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB0_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 2.250e-9
Identity = 59/217 (27.19%), Postives = 94/217 (43.32%), Query Frame = 0
Query:  177 YVEYIARATQGDGVGEAFMKKYVAQPRIPEHA--RYGKAKEMVEKKLRISGESLC--GTWRQDFRDTIMRYPHYGYLNVMGDESHVT------------------DRCSACNRSNRTSV-VAFLSGAEYEPNRVWDGLRWDKHLPEHWDNPGAMAISKQARICFRMHRSSKATHFLGDTCKHKSHLFHSLTHYKLYLVSKVAAKINEDDDLEPENFR 370
            Y+E++A+A QG G G AFM+K+ ++     HA   Y KA +  E ++    ES+   G+W Q+F   +  YP  G+   +  E                      D C+AC+R  R ++   +L+G+         G +  + + E                             LG  C++KSHL+H+L HYKLYLV KV   ++    + PE+ R
Sbjct:  940 YLEFLAKAVQGGGKGAAFMEKFDSK----RHAFTDYRKAIKNFEGRVCTIRESIAAGGSWNQEFMTAVTSYPFVGFHFGVSHEGPTEIDDEEEGQDIDWESLGRPDPCAACHRRQRENMSTMYLAGSR-------GGYKSKQKVRERLG--------------------------LGGRCRYKSHLYHTLLHYKLYLVCKVREHMD-TTGVGPEDLR 1118          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig779.16736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KKK5_9PHAE1.410e-19180.49DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
D7G8T8_ECTSI7.030e-10064.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8T9_ECTSI5.430e-8188.51DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FLB0_ECTSI2.250e-927.19RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025451Domain of unknown function DUF4211PFAMPF13926DUF4211coord: 131..285
e-value: 7.1E-9
score: 35.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig779contigL-elsbetiae_contig779:8168..17564 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig779.16736.1mRNA_L-elsbetiae_contig779.16736.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig779 1178..17564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig779.16736.1 ID=prot_L-elsbetiae_contig779.16736.1|Name=mRNA_L-elsbetiae_contig779.16736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=508bp
MITRARRKSSMVNYRDMLRTDGVSSSSDEAGDSSGDSSDDDAAATAAAAA
AAGGGECVGGRDEDADADDGFAENLHDDEEDDDDDDEGEEEEDEVERKKA
GTTTRRRGRRNRNRYGVSDDDDDDDNDGVVDDDEDEDEGDASFSHAAFFH
EMEQSQDGGVSSLSVGTMTFKEAFLFYVEYIARATQGDGVGEAFMKKYVA
QPRIPEHARYGKAKEMVEKKLRISGESLCGTWRQDFRDTIMRYPHYGYLN
VMGDESHVTDRCSACNRSNRTSVVAFLSGAEYEPNRVWDGLRWDKHLPEH
WDNPGAMAISKQARICFRMHRSSKATHFLGDTCKHKSHLFHSLTHYKLYL
VSKVAAKINEDDDLEPENFRGEGGPQTSKKKKKRCLNFSENEFESLSSLL
TKADDLNGVKWGGRVGVRGGHGKTFLQAGAASSILDWLSGEAPPEQYGDL
NLGPGGAAVAAAGAGGSGAGLGEDEAKGHDDDDDEEEFHVGRGRRWRTVG
SSGGRYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025451DUF4211