prot_L-elsbetiae_contig7436.16325.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7436.16325.1
Unique Nameprot_L-elsbetiae_contig7436.16325.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length393
Homology
BLAST of mRNA_L-elsbetiae_contig7436.16325.1 vs. uniprot
Match: D7G7W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W5_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 1.980e-106
Identity = 268/396 (67.68%), Postives = 290/396 (73.23%), Query Frame = 0
Query:    7 LSRKEKLALWRAQK---------AGTXXXXXXXXXXXXXGKXXXXXXXXXXXGVLAERANNSAGNCVPGKKRAASHASKGDRGRGLQRKPFQVDARRVREASERRVAPGTPIHSLKKRLKHTSEAHKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVPGHVNGVSRSLDAARTKEVSDYLKSQISEANMLMEISGVDAARTLLADLLSCTDAARGVGELALYWAARAKLEEDAGEYREARQLLDEGEAYISMPTQQKVMTKVMAAFEGRMSDREEVEVARLLEDSVGSMSLNDSAANSNSPAGSAPFRYDPNDLSMGDDDDSASPLSAIKNLNFSRVAREGDISESGSASTTGRNGGXXXXXXXXXXXXXXXXAFSPDWMREA 393
            LSRKEKLA WRA K         A  XXXXXXXXXXXXX  X          GVL  +A   AGN V   KR A            QRKPFQVD R +++ASERRV PGTPIHSLKKRLK T+ A    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVPGHVNGVSRSLD+ARTKEVSDYLKSQISEANML+EI+GVDAARTLL DLLSC  A RGVGELALYWAARAKLEEDAG Y EAR+LLD+GEAYISMPTQQKVM KVMAAFEGRM+ R E ++ RLLEDSV  +SLNDSAANSNSPA S PFRYDPNDLS   +DD+ S  SAIKNLNFS++A+E       S+ST+G                      SPDWMR+A
Sbjct:    5 LSRKEKLAAWRAAKGKPLEAHKPAAXXXXXXXXXXXXXXXXXGRAGKKDVAKGVL--QARPGAGNRV--NKRTAPP----------QRKPFQVDTRSIQQASERRVQPGTPIHSLKKRLKRTAVAXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVPGHVNGVSRSLDSARTKEVSDYLKSQISEANMLLEIAGVDAARTLLGDLLSCAGAGRGVGELALYWAARAKLEEDAGMYLEARKLLDDGEAYISMPTQQKVMAKVMAAFEGRMNARAEADIDRLLEDSVDGLSLNDSAANSNSPASSTPFRYDPNDLST--EDDTGSAQSAIKNLNFSKIAKESGGRGGASSSTSGSGSNTSLTTRSGA---------SPDWMRDA 373          
BLAST of mRNA_L-elsbetiae_contig7436.16325.1 vs. uniprot
Match: A0A6H5L268_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L268_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 3.200e-99
Identity = 264/396 (66.67%), Postives = 286/396 (72.22%), Query Frame = 0
Query:    7 LSRKEKLALWRAQK---------AGTXXXXXXXXXXXXXGKXXXXXXXXXXXGVLAERANNSAGNCVPGKKRAASHASKGDRGRGLQRKPFQVDARRVREASERRVAPGTPIHSLKKRLKHTSEAHKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVPGHVNGVSRSLDAARTKEVSDYLKSQISEANMLMEISGVDAARTLLADLLSCTDAARGVGELALYWAARAKLEEDAGEYREARQLLDEGEAYISMPTQQKVMTKVMAAFEGRMSDREEVEVARLLEDSVGSMSLNDSAANSNSPAGSAPFRYDPNDLSMGDDDDSASPLSAIKNLNFSRVAREGDISESGSASTTGRNGGXXXXXXXXXXXXXXXXAFSPDWMREA 393
            LSRKEKLA WRA K         A  XXXXXXXXXXXXX  X          GVL  +A   AGN V   KR A            QRKPFQVD R +++ASERRV PGTPIHSLKKRLK T+ A   AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVPGH+NGVSRSLD+ARTKEVSDYLKSQISEANML+EI+GVDAARTLL DLL      RGVGELALYWAARAKLEEDAG Y EAR+LLD+GEAYISMPTQQKVM KV+AAFEGRM+ R E ++ RLLEDSV  +SLN+SAANSNSPA SAPFRYDPNDLS   +DD+ S  SAIKNLNFS++A+E       S     R G                 A SPDWMR A
Sbjct:    5 LSRKEKLAAWRAAKGKPLEAHKAAXXXXXXXXXXXXXXXXXXGRAGKKDVAKGVL--QARPGAGNMV--NKRTAPP----------QRKPFQVDTRSIQQASERRVQPGTPIHSLKKRLKRTAVA---AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVPGHMNGVSRSLDSARTKEVSDYLKSQISEANMLLEIAGVDAARTLLGDLLYSAGGGRGVGELALYWAARAKLEEDAGMYLEARKLLDDGEAYISMPTQQKVMAKVVAAFEGRMNARAEADIDRLLEDSVDGLSLNNSAANSNSPASSAPFRYDPNDLST--EDDTGSAQSAIKNLNFSKIAKESGGRGGASVDRASRAGSSTSGSGSNTSLTTRSGA-SPDWMRGA 380          
BLAST of mRNA_L-elsbetiae_contig7436.16325.1 vs. uniprot
Match: A0A835Z189_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z189_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.100e-13
Identity = 44/94 (46.81%), Postives = 67/94 (71.28%), Query Frame = 0
Query:  186 VSDYLKSQISEANMLMEISGVDAARTLLADLLSCTDAARGVGELALYWAARAKLEEDAGEYREARQLLDEGEAYISMPTQQKVMTKVMAAFEGR 279
            +SD L++ + +A  + +I G +AA TLL ++L+ +   + V E ALYWAARA+L ED G +R AR +LDEG+AY+S+  Q+ V+ K++AAFE R
Sbjct:    1 MSDILRTNVEQAEAIQKIGGTEAALTLL-EVLAKSRIYKDVTEFALYWAARARLHEDDGNWRIARSILDEGDAYMSLTPQKMVLGKIIAAFEKR 93          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7436.16325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7W5_ECTSI1.980e-10667.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L268_9PHAE3.200e-9966.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z189_9STRA2.100e-1346.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7436contigL-elsbetiae_contig7436:1076..6021 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7436.16325.1mRNA_L-elsbetiae_contig7436.16325.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7436 1076..6021 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7436.16325.1 ID=prot_L-elsbetiae_contig7436.16325.1|Name=mRNA_L-elsbetiae_contig7436.16325.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=393bp
MQSNFGLSRKEKLALWRAQKAGTGAGAGAGAGAGEGGKSKAGDSSGSGAG
VLAERANNSAGNCVPGKKRAASHASKGDRGRGLQRKPFQVDARRVREASE
RRVAPGTPIHSLKKRLKHTSEAHKPAPAPSAAAAAAAAAAAAPSGASAVV
PTARAQAKAKAAAAARVPGHVNGVSRSLDAARTKEVSDYLKSQISEANML
MEISGVDAARTLLADLLSCTDAARGVGELALYWAARAKLEEDAGEYREAR
QLLDEGEAYISMPTQQKVMTKVMAAFEGRMSDREEVEVARLLEDSVGSMS
LNDSAANSNSPAGSAPFRYDPNDLSMGDDDDSASPLSAIKNLNFSRVARE
GDISESGSASTTGRNGGSTTGRNGGSTTGRNGGAFSPDWMREA
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