prot_L-elsbetiae_contig7410.16294.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7410.16294.1
Unique Nameprot_L-elsbetiae_contig7410.16294.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length205
Homology
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BLAST of mRNA_L-elsbetiae_contig7410.16294.1 vs. uniprot
Match: D7FKD2_ECTSI (Coiled-coil domain 6-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD2_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 2.510e-16
Identity = 144/204 (70.59%), Postives = 155/204 (75.98%), Query Frame = 0 
Query:    1 MEKHKNSHLESELVKLRKSSVEISQQVEAEEECLINRVRVSSCQTPLGGLPTAYSRMMKRLMEXXXXXXXXXXXXXXXXXLLTNTLQKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDQLAREQGQVKALTEDKGELEARVEEGAKALLSKLRGALDRAHKR 204
            MEKHKNSHLE ELVKLRKS+VEISQQVEAEEECLINR                   MMKRLME           XXXXXX         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   VE+QLA+E+G+VKA+T +KGELE   E+GAKALLSKL+ A++RAH R
Sbjct:   56 MEKHKNSHLEGELVKLRKSAVEISQQVEAEEECLINRTXXXXXXXXXXXXX-----MMKRLMELKKEKEDLALEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAVEEQLAQERGEVKAVTAEKGELEILFEQGAKALLSKLQEAVERAHDR 254
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7410.16294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKD2_ECTSI2.510e-1670.59Coiled-coil domain 6-like protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..110
NoneNo IPR availableCOILSCoilCoilcoord: 141..182
NoneNo IPR availableCOILSCoilCoilcoord: 112..132
IPR019152Protein of unknown function DUF2046PFAMPF09755DUF2046coord: 57..124
e-value: 1.3E-17
score: 64.0
coord: 117..189
e-value: 9.7E-10
score: 38.2
IPR019152Protein of unknown function DUF2046PANTHERPTHR15276H4 D10S170 PROTEIN-RELATEDcoord: 55..121
coord: 109..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7410contigL-elsbetiae_contig7410:2841..9721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7410.16294.1mRNA_L-elsbetiae_contig7410.16294.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7410 2811..9721 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7410.16294.1 ID=prot_L-elsbetiae_contig7410.16294.1|Name=mRNA_L-elsbetiae_contig7410.16294.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=205bp
MEKHKNSHLESELVKLRKSSVEISQQVEAEEECLINRVRVSSCQTPLGGL
PTAYSRMMKRLMELKKEKEDLALEVEREEELLTNTLQKKLNQLRQEKVDL
ENQLEREQEYVVNKLRKQLAQVTADKERMAMEVEREEEFLTNKLVKKLDQ
LKEEKAAVEDQLAREQGQVKALTEDKGELEARVEEGAKALLSKLRGALDR
AHKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019152DUF2046