prot_L-elsbetiae_contig7396.16273.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7396.16273.1
Unique Nameprot_L-elsbetiae_contig7396.16273.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length197
Homology
BLAST of mRNA_L-elsbetiae_contig7396.16273.1 vs. uniprot
Match: A0A6H5JS60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS60_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 1.440e-106
Identity = 163/199 (81.91%), Postives = 182/199 (91.46%), Query Frame = 0
Query:    1 MKSVVGGGALGLATVFSPARSQPAAAVAQSLEDLEADLIICKEVFKPALQYLKAEQFDAARTNTNYISRVINIKKKIDAFIVQANDIIDDADT---LEKAFDMAQEVDALFTNFDASVYTIIFIPADSAGVLPPGAEKYLKQAYGFYDDINKVLDFYIGLVPPETKAAAEKLLPAKREPLPKFLFKEKSAIMREKVAIS 196
            +K+V+GGGALGLAT FSPA S+ A A AQSLE+LEAD++ICKEVFKP LQYLKAEQFDAARTNTNYI+R  N+KKKID+FIVQA+D++DD DT   +EKAFDMAQEV+ALFTNFD+SVYTIIFIPAD+ GVLPPGAEKYLKQAYGFYDDINKVLDFYI LVPPETKAAAEKLLPAKR PLP FLFKEKS +M+EKVAIS
Sbjct:   72 VKTVLGGGALGLATAFSPALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVDDPDTASFIEKAFDMAQEVEALFTNFDSSVYTIIFIPADAEGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPGFLFKEKSTLMKEKVAIS 270          
BLAST of mRNA_L-elsbetiae_contig7396.16273.1 vs. uniprot
Match: D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 9.230e-101
Identity = 159/194 (81.96%), Postives = 179/194 (92.27%), Query Frame = 0
Query:    1 MKSVVGGGALGLATVFSPARSQPAAAVAQSLEDLEADLIICKEVFKPALQYLKAEQFDAARTNTNYISRVINIKKKIDAFIVQANDIIDDADTLEKAFDMAQEVDALFTNFDASVYTIIFIPADSAGVLPPGAEKYLKQAYGFYDDINKVLDFYIGLVPPETKAAAEKLLPAKREPLPKFLFKEKSAIMREKVA 194
            +K+V+GGGALGLAT FSPA S+ A A AQSLE+LEAD++ICKEVFKP LQYLKAEQFDAARTNTNYI+R  N+KKKID+FIVQA+D+++D DT+EKAFDMAQEV+ALFTNFD+SVYTIIFIPAD+ GVLPPGAEKYLKQAYGFYDDINKVLDFYI LVPPETKAAAEKLLPAKR PLP FLFKEKS +M+EK A
Sbjct:   74 VKTVLGGGALGLATAFSPALSKRAEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVEDPDTMEKAFDMAQEVEALFTNFDSSVYTIIFIPADADGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPSFLFKEKSTLMKEKCA 267          
BLAST of mRNA_L-elsbetiae_contig7396.16273.1 vs. uniprot
Match: A0A835YWX6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX6_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.690e-40
Identity = 79/188 (42.02%), Postives = 115/188 (61.17%), Query Frame = 0
Query:    3 SVVGGGALGLATVFSPARSQPAAAVAQSLEDLEADLIICKEVFKPALQYLKAEQFDAARTNTNYISRVINIKKKIDAFIVQANDIIDDADTLEKAFDMAQEVDALFTNFDASVYTIIFIPADSAGVLPPGAEKYLKQAYGFYDDINKVLDFYIGLVPPETKAAAEKLLPAKREPLPKFLFKEKSAIMR 190
            SVV GGA    T ++  +   AAA  Q+ ED  A L++CK V +P+ +Y K  QFD+ARTN NYI+R + ++K I   I++   I DD   +E+A D+A   D+ F+N+D+S+YT+IFIP    G LP G++KY  QA  +YD    +LD +I L P + +  A     A+ + LP+FLFKE +A  R
Sbjct:   14 SVVLGGAAAAFTAWTHPKVAQAAAPEQTFEDAVATLMVCKAVLEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICDDEALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQADVYYDQSVHMLDVFISLAPEDVRERARAKAEARVKELPRFLFKEFTAAGR 201          
BLAST of mRNA_L-elsbetiae_contig7396.16273.1 vs. uniprot
Match: A0A7S0BNM4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNM4_9RHOD)

HSP 1 Score: 85.1 bits (209), Expect = 4.820e-17
Identity = 56/147 (38.10%), Postives = 84/147 (57.14%), Query Frame = 0
Query:   21 SQPAAAVAQSLEDLEADLII-CKEVFKPALQYLKAEQFDAARTNTNYISRVINIKKKIDAFIVQANDIIDDADTLEKAFDMAQEVDALFTNFDASVYTIIFIPADSAGVLPPGAEKYLKQAYGFYDDINKVLDFYIGLVPPETKAAA 166
            S PAAA   S  D     I  C+ V +P  +Y++  ++D ARTN NY +R + +K  +  F    ++I+DD   LE   ++  E++ +FT  DASVYT IFIP+D    + P  EKY KQA+ +Y+   ++L  Y+ LVP + K  A
Sbjct:   53 SGPAAATKMSPIDTSLLRICECERVMRPVRKYIEKGEWDRARTNINYCTRNLRLKTNMKVF----SEIMDDP--LE-GIEIMAELENVFTQMDASVYTPIFIPSDEG--ISPEQEKYQKQAFLYYEQAMRMLGDYLALVPQDKKVGA 190          
BLAST of mRNA_L-elsbetiae_contig7396.16273.1 vs. uniprot
Match: A0A0G4FXH9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FXH9_VITBC)

HSP 1 Score: 74.3 bits (181), Expect = 5.740e-13
Identity = 50/152 (32.89%), Postives = 85/152 (55.92%), Query Frame = 0
Query:   36 ADLIICKEVFKPALQYLKAEQFDAARTNTNYISRVINIKKKIDAFIVQANDIIDDADTLEKAFDMAQEVDALFTNFDASVYTIIFIPADSAGVLPPGAEKYLKQAYGFYDDINKVLDFYIGLVPPETKAAAEKLLPAKREPLPKFLFKEKSA 187
            A + +C+    P   Y+   Q+D AR+N NY +RV+    ++++ + + ++ ID+ + LE A D+   +    ++ D+S+YT IF   D+A        KY K+ Y +YD+   +LD +I L+P E  A + +L  A+  PLPKFL   +SA
Sbjct:   57 ATVFVCRRAMDPVKGYIAEGQWDRARSNVNYCTRVL----RLNSVLKKVSNDIDEVEGLEIAGDLLNTM----SDLDSSIYTPIFA-FDTASGTQRSFAKYQKECYRYYDESVALLDRFIQLLPSELLAESSQLADAR--PLPKFLGIPQSA 197          
BLAST of mRNA_L-elsbetiae_contig7396.16273.1 vs. uniprot
Match: A0A2V3IGD1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGD1_9FLOR)

HSP 1 Score: 57.0 bits (136), Expect = 4.040e-7
Identity = 36/121 (29.75%), Postives = 61/121 (50.41%), Query Frame = 0
Query:   47 PALQYLKAEQFDAARTNTNYISRVINIKKKIDAFIVQANDIIDDADTLEKAFDMAQEVDALFTNFDASVYTIIFIPADSAGVLPPGAEKYLKQAYGFYDDINKVLDFYIGLVPPETKAAAE 167
            P  +Y+    +D  RTN NY +R++ ++K +     Q +      D    A D+  ++D   T  DAS+YT +FIPAD  GV    A KY +QA  +Y +    ++ ++  +P +    A+
Sbjct:    3 PVRRYIDEGAWDKGRTNVNYCTRMLALRKNMKKVAEQLS-----GDDYYDALDITADLDNTMTQLDASLYTPLFIPADD-GVSVEQA-KYQRQASEYYSNALDYIESFLSKLPTDVLERAQ 116          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7396.16273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JS60_9PHAE1.440e-10681.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL66_ECTSI9.230e-10181.96TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YWX6_9STRA2.690e-4042.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0BNM4_9RHOD4.820e-1738.10Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A0G4FXH9_VITBC5.740e-1332.89Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A2V3IGD1_9FLOR4.040e-729.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..196
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7396contigL-elsbetiae_contig7396:2560..6449 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7396.16273.1mRNA_L-elsbetiae_contig7396.16273.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7396 1811..6474 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7396.16273.1 ID=prot_L-elsbetiae_contig7396.16273.1|Name=mRNA_L-elsbetiae_contig7396.16273.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=197bp
MKSVVGGGALGLATVFSPARSQPAAAVAQSLEDLEADLIICKEVFKPALQ
YLKAEQFDAARTNTNYISRVINIKKKIDAFIVQANDIIDDADTLEKAFDM
AQEVDALFTNFDASVYTIIFIPADSAGVLPPGAEKYLKQAYGFYDDINKV
LDFYIGLVPPETKAAAEKLLPAKREPLPKFLFKEKSAIMREKVAIS*
back to top