prot_L-elsbetiae_contig7350.16224.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7350.16224.1
Unique Nameprot_L-elsbetiae_contig7350.16224.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length182
Homology
BLAST of mRNA_L-elsbetiae_contig7350.16224.1 vs. uniprot
Match: D8LT28_ECTSI (RING-Gid-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT28_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 6.280e-100
Identity = 149/180 (82.78%), Postives = 162/180 (90.00%), Query Frame = 0
Query:    2 REAMLYARQHLRPVSQGHDREFRELMGCLAFSGSLETSPYSHLLSSSLWARAKESVAVDGSRVSGLSRESILSVAFRAGVLALPTLIKMAAVVRGSNQEWDGMRELPLEVPLPAGLRYHSMFSCPVTREPSTLDNPPVLLKCGHAVLRSSVSRLARSGSRFKCPTCPVEQTENETMALTL 181
            REAM+YAR+ + PV+  H RE +ELMG L +SG+LE SPYSHLLS  LW R KESVAVD SRVSGLSRESILSVAFRAG+LALPTL+KMAAVVRGSNQEW+GM+ELPLEVPLP GLRYHSMFSCPV+REPSTLDNPPVLLKCGH VLRSSVSRLAR+GSRFKCPTCPVEQ ENETM LTL
Sbjct:   74 REAMMYARERVMPVAGRHMRELQELMGSLLWSGNLEASPYSHLLSLELWTRVKESVAVDASRVSGLSRESILSVAFRAGILALPTLVKMAAVVRGSNQEWNGMQELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHVVLRSSVSRLARNGSRFKCPTCPVEQMENETMPLTL 253          
BLAST of mRNA_L-elsbetiae_contig7350.16224.1 vs. uniprot
Match: A0A6H5K8M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M5_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 2.420e-98
Identity = 150/180 (83.33%), Postives = 163/180 (90.56%), Query Frame = 0
Query:    2 REAMLYARQHLRPVSQGHDREFRELMGCLAFSGSLETSPYSHLLSSSLWARAKESVAVDGSRVSGLSRESILSVAFRAGVLALPTLIKMAAVVRGSNQEWDGMRELPLEVPLPAGLRYHSMFSCPVTREPSTLDNPPVLLKCGHAVLRSSVSRLARSGSRFKCPTCPVEQTENETMALTL 181
            REAM+YAR+ + PV+ GH RE +ELMG L +SG+LE SPYSHLLS  LW R KESVAVD SR+SGLSRESILSVAFRAG+LALPTL+KMAAVVRGSN EW+GMRELPLEVPLP GLRYHSMFSCPV+REPSTLDNPPVLLKCGHAVLRSSVSRLAR+GSRFKCPTCPVEQ ENETM LTL
Sbjct:  300 REAMMYARERVMPVAGGHMRELQELMGSLLWSGNLEASPYSHLLSQELWTRVKESVAVDASRISGLSRESILSVAFRAGILALPTLVKMAAVVRGSNLEWNGMRELPLEVPLPPGLRYHSMFSCPVSREPSTLDNPPVLLKCGHAVLRSSVSRLARNGSRFKCPTCPVEQMENETMPLTL 479          
BLAST of mRNA_L-elsbetiae_contig7350.16224.1 vs. uniprot
Match: A0A015LDZ0_RHIIW (Ubiquitin-protein ligase RMD5 n=8 Tax=Glomeraceae TaxID=36751 RepID=A0A015LDZ0_RHIIW)

HSP 1 Score: 157 bits (396), Expect = 1.660e-43
Identity = 76/177 (42.94%), Postives = 108/177 (61.02%), Query Frame = 0
Query:    3 EAMLYARQHLRPVSQGHDREFRELMGCLAFSGSLETSPYSHLLSSSLWARAKESVAVDGSRVSGLSRESILSVAFRAGVLALPTLIKMAAVVRGSNQEWDGMRELPLEVPLPAGLRYHSMFSCPVTREPSTLDNPPVLLKCGHAVLRSSVSRLARSGSRFKCPTCPVEQTENETMAL 179
            EA++YA++        H  + + LM  LAFS  L TSPY  LLS  LW   +     D   + G+S ES L ++   G  ALPT++KMA +++    EW    ELP+EVPLP  +RYHS+F+CPV++E ST  NPP++L CGH +   S+++L+R  SRFKCP CP E   N+ + +
Sbjct:  175 EALVYAKKKFPLFHSRHIFDIKRLMCALAFSNRLSTSPYKDLLSPDLWIELQNKFMRDFCNLLGMSSESPLYISVTVGATALPTILKMATIMKEKKNEWSQQDELPVEVPLPDYMRYHSIFACPVSKEQSTEKNPPMMLPCGHVICHESLNKLSRGNSRFKCPYCPHESIANQALRI 351          
BLAST of mRNA_L-elsbetiae_contig7350.16224.1 vs. uniprot
Match: A0A7S1EG09_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EG09_HEMAN)

HSP 1 Score: 151 bits (382), Expect = 4.480e-43
Identity = 76/179 (42.46%), Postives = 111/179 (62.01%), Query Frame = 0
Query:    3 EAMLYARQHLRPVSQGHDREFRELMGCLAFSGSLETSPYSHLLSSSLWARAKESVAVDGSRVSGLSRESILSVAFRAGVLALPTLIKMAAVVRGSNQEWDGMRELPLEVPLPAGLRYHSMFSCPVTREPSTLDNPPVLLKCGHAVLRSSVSRLARSGSRFKCPTCPVEQTENETMALTL 181
            +A+ +AR           RE + LMGCLAF G L+TSPY+       W R  + +A DGSR+ GL R+  L V   AGV ALP+L+K A+V++G   EW     LP+E+ L    +YHS+F CPV+RE ++ DNPP++++CGH +   S+ +++R  +RFKCP CPVE + + +  L L
Sbjct:   28 DAVRHARGSFDRYMPARLREVQRLMGCLAFVGRLDTSPYASFFDEGEWDRLSQRLAGDGSRLLGLPRDLPLGVCVEAGVKALPSLLKFASVMQGRIGEWGSKTALPVEIDLGPERKYHSVFVCPVSREQASADNPPMMMQCGHVLCEHSLKKVSRGAARFKCPYCPVEVSVHGSTRLHL 206          
BLAST of mRNA_L-elsbetiae_contig7350.16224.1 vs. uniprot
Match: A0A7I8K265_SPIIN (Hypothetical protein n=3 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K265_SPIIN)

HSP 1 Score: 156 bits (394), Expect = 7.100e-43
Identity = 81/179 (45.25%), Postives = 114/179 (63.69%), Query Frame = 0
Query:    4 AMLYARQHLRPVSQGHDREFRELMGCLAFSGSLETSPYSHLLSSSLWARAKESVAVDGSRVSGLSRESILSVAFRAGVLALPTLIKMAAVVRGSNQEWDGMRELPLEVPLPAGLRYHSMFSCPVTREPSTLDNPPVLLKCGHAVLRSSVSRLARSGSR-FKCPTCPVEQTENETMALTL 181
            A+ YAR HL P +  H  E ++LM CL ++  L+ SPY+  LS +LW    E +     R+ G S ES L+VA  AGV ALPTL+K+A V+    QEW  M++LP+ V L    ++HS+F CPV+REP++ +NPP+L+ CGHA+ + SV +L++  SR FKCP CP E T  +   L L
Sbjct:  210 ALRYARSHLSPFASLHMAEVQKLMACLLWADRLDQSPYAEFLSPTLWDSTAEELTRQFCRLLGQSCESPLAVAVAAGVQALPTLLKLAGVMASKKQEWQAMKQLPVAVDLGKEFQFHSIFVCPVSREPASEENPPMLMPCGHALCKQSVVKLSKGSSRAFKCPYCPSEATVAQCRQLHL 388          
BLAST of mRNA_L-elsbetiae_contig7350.16224.1 vs. uniprot
Match: K3XXG4_SETIT (Uncharacterized protein n=16 Tax=Panicoideae TaxID=147369 RepID=K3XXG4_SETIT)

HSP 1 Score: 153 bits (387), Expect = 8.020e-42
Identity = 79/178 (44.38%), Postives = 110/178 (61.80%), Query Frame = 0
Query:    3 EAMLYARQHLRPVSQGHDREFRELMGCLAFSGSLETSPYSHLLSSSLWARAKESVAVDGSRVSGLSRESILSVAFRAGVLALPTLIKMAAVVRGSNQEWDGMRELPLEVPLPAGLRYHSMFSCPVTREPSTLDNPPVLLKCGHAVLRSSVSRLARSGSR-FKCPTCPVEQTENETMAL 179
            EA+ YAR HL P +  H  EF++LM CL + G L+ SPYS L+SS+ W +  E +      + G SRES LSVA  AG   LPTL+K+  V+    QEW  M++LP+ + +    +YHS+F CPV RE S+ +NPP+ + CGH V + S+ +L++S SR FKCP CP E   +    L
Sbjct:  211 EAIQYARTHLVPFASVHKEEFQKLMACLLWVGRLDQSPYSELMSSAHWDKLAEELTHQFCSLLGQSRESPLSVAVSAGFQGLPTLLKLTQVMAAKKQEWQVMKQLPVPIDIGPEFQYHSVFVCPVLREQSSDENPPMRMPCGHVVSKQSIMKLSKSSSRPFKCPYCPSEAVASHCKQL 388          
BLAST of mRNA_L-elsbetiae_contig7350.16224.1 vs. uniprot
Match: UPI001BF29C4E (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF29C4E)

HSP 1 Score: 153 bits (387), Expect = 1.170e-41
Identity = 77/180 (42.78%), Postives = 114/180 (63.33%), Query Frame = 0
Query:    3 EAMLYARQHLRPVSQGHDREFRELMGCLAFSGSLETSPYSHLLSSSLWARAKESVAVDGSRVSGLSRESILSVAFRAGVLALPTLIKMAAVVRGSNQEWDGMRELPLEVPLPAGLRYHSMFSCPVTREPSTLDNPPVLLKCGHAVLRSSVSRLARSGSR-FKCPTCP--VEQTENETMAL 179
            EA+ Y R HL P+S  H  E ++LM CL F+G L++SPYS L+S + W +  E ++     + G S ES LSV   AG+  LP L+K   V+ G  QEW  M++LP+ V L    ++HS+F CPV++E ST DNPP+L+ CGH + + S+ +++++ S+ FKCP CP  VE T++    L
Sbjct:  202 EALKYVRNHLTPLSSDHMAELQKLMACLLFTGRLDSSPYSALISPTNWEKLAEELSKQFCNILGYSFESPLSVTIAAGIQGLPPLLKFMNVMAGKKQEWQTMKQLPVPVELDKEFQFHSVFVCPVSKEQSTDDNPPMLMPCGHVLCKQSIMKMSKNSSKSFKCPYCPSDVEATKSPQSPL 381          
BLAST of mRNA_L-elsbetiae_contig7350.16224.1 vs. uniprot
Match: A0A5J4Z334_PORPP (Protein RMD5-like A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z334_PORPP)

HSP 1 Score: 154 bits (388), Expect = 1.230e-41
Identity = 75/174 (43.10%), Postives = 115/174 (66.09%), Query Frame = 0
Query:    4 AMLYARQHLRPVSQGHDREFRELMGCLAFSGSLETSPYSHLLSSSLWARAKESVAVDGSRVSGLSRESILSVAFRAGVLALPTLIKMAAVVRGSNQ--EWDGMRELPLEVPLPAGLRYHSMFSCPVTREPSTLDNPPVLLKCGHAVLRSSVSRLARSGSRFKCPTCPVEQTENE 175
            A+ YAR+H    ++    + +  MG L ++  LETSPY+ L+S ++W++  E+ + D  R+ G++++S L V   AG LA+P L K + +    N+  EW G   LP+E+PLP   R+HS+F+CPV+RE ST DNPP++L CGHA+ ++S+ RL R  SRFKCP CP EQ+ ++
Sbjct:  250 AVKYAREHFGRFAKSSLPDIQRHMGFLLYATRLETSPYAPLVSETMWSQVIETFSRDSCRILGMAQDSALHVVVSAGTLAIPVLSKASRIRTPMNESSEWTGADHLPVEIPLPQEFRFHSIFACPVSREESTPDNPPMILFCGHALCKNSIGRLPRGNSRFKCPYCPSEQSPSK 423          
BLAST of mRNA_L-elsbetiae_contig7350.16224.1 vs. uniprot
Match: D5ACI4_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5ACI4_PICSI)

HSP 1 Score: 152 bits (384), Expect = 1.970e-41
Identity = 76/172 (44.19%), Postives = 112/172 (65.12%), Query Frame = 0
Query:    2 REAMLYARQHLRPVSQGHDREFRELMGCLAFSGSLETSPYSHLLSSSLWARAKESVAVDGSRVSGLSRESILSVAFRAGVLALPTLIKMAAVVRGSNQEWDGMRELPLEVPLPAGLRYHSMFSCPVTREPSTLDNPPVLLKCGHAVLRSSVSRLARSGSR-FKCPTCPVEQT 172
            R+A+ +AR    P +  H  E ++LMGCL ++G LE SPYS LLSSS W      +  +   + G S +S L V   AG  ALPTL+K++ V+    QEW  MR+LP+E+ L    ++HS+F+CPV+R+ ST +NPP+L+ CGH + + S+ +L++S +R FKCP CP+E T
Sbjct:  204 RDALTFARSSFAPFAPLHMEEIQKLMGCLLWTGRLENSPYSELLSSSHWDALSLELTQECCSLLGQSYKSPLHVTISAGCQALPTLLKLSNVMANKKQEWQTMRQLPVEIELDREFQFHSIFACPVSRDQSTEENPPMLMPCGHVLCKQSIVKLSKSNTRTFKCPYCPLEAT 375          
BLAST of mRNA_L-elsbetiae_contig7350.16224.1 vs. uniprot
Match: A0A833UL88_JUGRE (Uncharacterized protein n=4 Tax=Juglandaceae TaxID=16714 RepID=A0A833UL88_JUGRE)

HSP 1 Score: 153 bits (386), Expect = 2.640e-41
Identity = 78/180 (43.33%), Postives = 114/180 (63.33%), Query Frame = 0
Query:    3 EAMLYARQHLRPVSQGHDREFRELMGCLAFSGSLETSPYSHLLSSSLWARAKESVAVDGSRVSGLSRESILSVAFRAGVLALPTLIKMAAVVRGSNQEWDGMRELPLEVPLPAGLRYHSMFSCPVTREPSTLDNPPVLLKCGHAVLRSSVSRLARSGSR-FKCPTCP--VEQTENETMAL 179
            EA+ YAR HL P S  H  E ++LM CL F+G L++SPYS L+S + W +  E ++     + G S ES LSV   AGV  LP L+K   V+ G  QEW  M++LP+ V L    ++HS+F CPV++E ST DNPP+L+ CGH + + S+ +++++ ++ FKCP CP  VE T+   + L
Sbjct:  255 EALKYARNHLTPFSSDHMAELQKLMACLLFTGRLDSSPYSALISPTNWEKLAEELSKQFCNILGYSFESPLSVTIAAGVQGLPPLLKFMNVMAGKKQEWQTMKQLPVPVELDKEFQFHSVFVCPVSKEQSTDDNPPMLMPCGHVLCKQSIMKMSKNSTKSFKCPYCPSDVEATKCRQLYL 434          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7350.16224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LT28_ECTSI6.280e-10082.78RING-Gid-type domain-containing protein n=1 Tax=Ec... [more]
A0A6H5K8M5_9PHAE2.420e-9883.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A015LDZ0_RHIIW1.660e-4342.94Ubiquitin-protein ligase RMD5 n=8 Tax=Glomeraceae ... [more]
A0A7S1EG09_HEMAN4.480e-4342.46Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7I8K265_SPIIN7.100e-4345.25Hypothetical protein n=3 Tax=Spirodela intermedia ... [more]
K3XXG4_SETIT8.020e-4244.38Uncharacterized protein n=16 Tax=Panicoideae TaxID... [more]
UPI001BF29C4E1.170e-4142.78Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
A0A5J4Z334_PORPP1.230e-4143.10Protein RMD5-like A n=1 Tax=Porphyridium purpureum... [more]
D5ACI4_PICSI1.970e-4144.19Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
A0A833UL88_JUGRE2.640e-4143.33Uncharacterized protein n=4 Tax=Juglandaceae TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013144CRA domainSMARTSM00757toby_final6coord: 1..93
e-value: 8.6E-8
score: 41.9
IPR024964CTLH/CRA C-terminal to LisH motif domainPFAMPF10607CLTHcoord: 2..87
e-value: 1.5E-9
score: 37.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 117..180
e-value: 9.1E-7
score: 30.0
IPR027711Rmd5PANTHERPTHR12170:SF3SPORULATION PROTEIN RMD5coord: 3..178
NoneNo IPR availablePANTHERPTHR12170MACROPHAGE ERYTHROBLAST ATTACHER-RELATEDcoord: 3..178
NoneNo IPR availablePROSITEPS51867ZF_RING_GIDcoord: 125..167
score: 10.65
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 120..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7350contigL-elsbetiae_contig7350:3946..6715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7350.16224.1mRNA_L-elsbetiae_contig7350.16224.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7350 2922..8527 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7350.16224.1 ID=prot_L-elsbetiae_contig7350.16224.1|Name=mRNA_L-elsbetiae_contig7350.16224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
MREAMLYARQHLRPVSQGHDREFRELMGCLAFSGSLETSPYSHLLSSSLW
ARAKESVAVDGSRVSGLSRESILSVAFRAGVLALPTLIKMAAVVRGSNQE
WDGMRELPLEVPLPAGLRYHSMFSCPVTREPSTLDNPPVLLKCGHAVLRS
SVSRLARSGSRFKCPTCPVEQTENETMALTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013144CRA_dom
IPR024964CTLH/CRA
IPR013083Znf_RING/FYVE/PHD
IPR027711Rmd5