prot_L-elsbetiae_contig735.16222.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig735.16222.1
Unique Nameprot_L-elsbetiae_contig735.16222.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length651
Homology
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BLAST of mRNA_L-elsbetiae_contig735.16222.1 vs. uniprot
Match: A0A6H5KC88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC88_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.700e-7
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:  458 RKCAKEGCKRRPTFGAEGTRQAQFCASHKPEGFVNVLCKR 497
            R C  EGCKRRP FGA+GTR+ QFC+ HKP GFVNV  +R
Sbjct:  430 RTCGMEGCKRRPLFGAQGTRRPQFCSGHKPAGFVNVASRR 469
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BLAST of mRNA_L-elsbetiae_contig735.16222.1 vs. uniprot
Match: D7G3Q3_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q3_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 2.300e-7
Identity = 44/59 (74.58%), Postives = 48/59 (81.36%), Query Frame = 0 
Query:  458 RKCAKEGCKRRPTFGAEGTRQAQFCASHKPEGFVNVLCKRXXXXXXXXXXXXXXXGAKP 516
            R C  EGCKRRP FGAEGTR+  FC+ HKP GFVNV  +RXXXXXXXXXXXXXX G+KP
Sbjct:  455 RTCGMEGCKRRPLFGAEGTRRPLFCSGHKPAGFVNVASRRXXXXXXXXXXXXXXPGSKP 513
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig735.16222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KC88_9PHAE1.700e-767.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3Q3_ECTSI2.300e-774.58EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig735contigL-elsbetiae_contig735:7087..9399 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig735.16222.1mRNA_L-elsbetiae_contig735.16222.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig735 6181..9791 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig735.16222.1 ID=prot_L-elsbetiae_contig735.16222.1|Name=mRNA_L-elsbetiae_contig735.16222.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=651bp
MGTSASVPIDIEAFRPPPGLPVQLDGYCSVADGVPATITSVAASPGLATG
TDEASASSAAATTAARCGGGGGGGGGENNGGHHQEAAEGRGPFEPAGASL
TTGCGSARTNPVATGKRPRVATAMSDDRNIGSSTGQEGEPPRKRSAGGTQ
VEGRVGVATPGLPAPGALEPPGVNVGTSPGPSTPEARPDATGTYTAALDA
INGDPATATAGNGALAAPVGFVTTPAAVSMELPQPETAVGAHAPPLQPPG
TPEAVAVAPPQPSLANGGEHPRPLFLDMLPLEKAVGSEGSDRSATLPPAP
LPPAPVWSSVPLPPRAVVAGAVTCDIPHLANGRFHQEPPPIQQSHAVPTP
AATAAFGVGPPAAPAGSVASHAGAGEGLASVAAAGGPSAAAPPRHYPPSF
VLPLPAEPAGGGVGTASGGGGNGGGRSGPAPRRRTNRKSGPAAAAAAAAG
KQQRQERRKCAKEGCKRRPTFGAEGTRQAQFCASHKPEGFVNVLCKRCSV
EGCKHQPSFGTPGAKPVRCATHRLAGMVNLSAARCASPGCRVVPSFARPG
ARKGRACAAHRGAGDVDVVTRRCHHEGCVRRPVFGDISAGKALYCSAHKL
DGMMNIFAARCTAMGCMELATFGVPDIKRPTHCTAHRDKLQHGRITNYHS
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