prot_L-elsbetiae_contig7348.16219.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7348.16219.1
Unique Nameprot_L-elsbetiae_contig7348.16219.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length161
Homology
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BLAST of mRNA_L-elsbetiae_contig7348.16219.1 vs. uniprot
Match: D7FM11_ECTSI (mRNA export factor GLE1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM11_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 5.730e-47
Identity = 100/150 (66.67%), Postives = 121/150 (80.67%), Query Frame = 0 
Query:    1 EGHEVWRRVKVAEEEHDHAADEKAAARLDRLEKLRAEALAAFSQAQEAHAELLASATTAFDSAEGPDMATLRSLFAGGANTPGSRFKDDREVSALHKKYADLEAFLQQLAAAESAGDAGGLEALLASEXXXXXKSQPEVASALKALQAAK 150
            EG E+WRRV VAEEEH  AA+EKA AR+ RL+ LRAEAL AF QAQEA A+L+A+A TAFD+AEGPDMA LRSLFAGGA++P SRFKDD+EV +L KKY+ LEAFL+Q+  A  AG++ GLEALL+SE     K+QPEV SA +AL+ AK
Sbjct:  365 EGLEMWRRVNVAEEEHGKAAEEKAMARMRRLKNLRAEALMAFGQAQEALADLVATANTAFDAAEGPDMAKLRSLFAGGADSPSSRFKDDKEVRSLQKKYSALEAFLKQVKDANGAGNSAGLEALLSSEAAKGVKNQPEVVSASEALETAK 514
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7348.16219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM11_ECTSI5.730e-4766.67mRNA export factor GLE1 n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 9..51
NoneNo IPR availableCOILSCoilCoilcoord: 143..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7348contigL-elsbetiae_contig7348:730..3835 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7348.16219.1mRNA_L-elsbetiae_contig7348.16219.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7348 730..3835 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7348.16219.1 ID=prot_L-elsbetiae_contig7348.16219.1|Name=mRNA_L-elsbetiae_contig7348.16219.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=161bp
EGHEVWRRVKVAEEEHDHAADEKAAARLDRLEKLRAEALAAFSQAQEAHA
ELLASATTAFDSAEGPDMATLRSLFAGGANTPGSRFKDDREVSALHKKYA
DLEAFLQQLAAAESAGDAGGLEALLASEAAESAKSQPEVASALKALQAAK
ARAEAEAEAAR
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