prot_L-elsbetiae_contig7347.16217.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7347.16217.1
Unique Nameprot_L-elsbetiae_contig7347.16217.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length136
Homology
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BLAST of mRNA_L-elsbetiae_contig7347.16217.1 vs. uniprot
Match: D7G116_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G116_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 2.910e-46
Identity = 73/78 (93.59%), Postives = 77/78 (98.72%), Query Frame = 0 
Query:   58 LDGAYKIGELVNFNGGRVQPQSLEPKHALTFRVEIGGHMVAYVSGESKPARRTRMVKTNLVARNGVFVHVVDKILYAE 135
            +DGAYKIGELVNFNGGRVQPQSLEPKHAL FRVEIGGHMVAYVSGE+KPARRTRMVKT+L+ARNGVFVHVVDKILYAE
Sbjct:    1 MDGAYKIGELVNFNGGRVQPQSLEPKHALIFRVEIGGHMVAYVSGETKPARRTRMVKTDLIARNGVFVHVVDKILYAE 78
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BLAST of mRNA_L-elsbetiae_contig7347.16217.1 vs. uniprot
Match: A0A8J2X3H5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X3H5_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 6.810e-15
Identity = 43/129 (33.33%), Postives = 73/129 (56.59%), Query Frame = 0 
Query:    9 ASSGCRWFLEAMRK-ANRLQGANSITILAPKDSAF-HSADAFEDSSWGLHILDGAYKIGELVNFNGGRVQPQSLEPKHALTFRVEIGGHMVAYVSGESKPARRTRMVKTNLVARNGVFVHVVDKILYAE 135
            A   C  F + +R+ A  L+G    T+L P D AF    DAFED  WG+H++DG +K+G++     GRV  + ++ +H +  RV+  G    ++  +  P RR  +++ ++  ++G  +HVVD ILY +
Sbjct:  353 ALENCGKFAQLVREQAPDLRGC---TVLVPTDDAFLGDDDAFEDDCWGVHVIDGPWKMGDMAV--AGRVLGRHVDTRHGIRTRVQPDGRYAVWLDTDPSPPRRALVLEMDISCQHGTVLHVVDGILYPD 476
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7347.16217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G116_ECTSI2.910e-4693.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J2X3H5_9STRA6.810e-1533.33Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036378FAS1 domain superfamilyGENE3D2.30.180.10coord: 13..134
e-value: 3.0E-10
score: 42.4
IPR036378FAS1 domain superfamilySUPERFAMILY82153FAS1 domaincoord: 2..133
IPR000782FAS1 domainPFAMPF02469Fasciclincoord: 17..133
e-value: 6.0E-7
score: 29.7
IPR000782FAS1 domainPROSITEPS50213FAS1coord: 1..132
score: 10.635

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7347contigL-elsbetiae_contig7347:4572..7022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7347.16217.1mRNA_L-elsbetiae_contig7347.16217.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7347 4572..7022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7347.16217.1 ID=prot_L-elsbetiae_contig7347.16217.1|Name=mRNA_L-elsbetiae_contig7347.16217.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp
PSTLTDVLASSGCRWFLEAMRKANRLQGANSITILAPKDSAFHSADAFED
SSWGLHILDGAYKIGELVNFNGGRVQPQSLEPKHALTFRVEIGGHMVAYV
SGESKPARRTRMVKTNLVARNGVFVHVVDKILYAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036378FAS1_dom_sf
IPR000782FAS1_domain