prot_L-elsbetiae_contig7341.16213.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7341.16213.1
Unique Nameprot_L-elsbetiae_contig7341.16213.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length592
Homology
BLAST of mRNA_L-elsbetiae_contig7341.16213.1 vs. uniprot
Match: D7FR15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR15_ECTSI)

HSP 1 Score: 508 bits (1309), Expect = 1.270e-165
Identity = 344/608 (56.58%), Postives = 388/608 (63.82%), Query Frame = 0
Query:    9 QAGVGTIYDLLGNVQESFEAISSCPLVSSLEGVEGGIASARDAVEVVVDDDELGSVGRAILSVHEVFSETATTRRGVVYAAGILVLIMSVVYVGVGYYALRKDGGQGKDGGARMRGPVLIGCLILPLTLLVIMLCWFLFGLSTSVALLTSDFCVDPSEHTTEAFSSPEDQEIVAFYTKCEGPNVFSDQLTTAFIQGRAAQGVLDALDDDEFAEQCPDEAASKVALDGNIAAILTQIDSLGALVQCSSINPFFVDGVEQSICNNAPRDVWFVIIGFAVVSVGLFVVAVSFRLLLQQKEEGLYKVVFDDELSPSVASSSDFGGSDDSFSRAHGGYAGGXXXXXXXXXXXXXXXXXXXRSGGAQVQ--QSSTSSSPXXXXXXXXXXXSRTPPRYGGGH-GVAAVEVGAWVRPPKKQTAP------------KGR--PVELAAPLPRSPAAAAAAAGGHVGRSRSRNP---FAAPDDSPSEDGGVWMRARRGEHSSAVSRARSAAIPRERSRRSNGRSGHHHPDDFASMSGKSRPSRLFRTLAGLDDPSEEAPSVIVSRHVGPRSTRNLGG----TGXXXXXXXXXXXXXXXXDGSRRHLTVAFGRASSVVG 592
            Q GV +IY LL NV+ SFE +SSC LVSSLEGVE GI SA+ AVE +++DD+LGSV   IL + E FS T TTRRGVVYAAG LVL+MSVVYV VGYYAL KD G+GK GGARMRGPVLIGCLILPLTLLVI+LCWFLFG+STSVALLTSDFCVDPS H TEAFS P DQE+VA+YT CEG N FSDQL TA++QG AAQG+LDALDDDEFA +CPDE  SK  LD NI  IL QIDSLG LVQC S+NP+FV+GVE+++C +AP  +WFVI GFAVVSVGLFVVAVSFRLLLQQKEEGLYKV+F+DE+  S  SSS  G SDDS+SRAH    G                      GG +VQ  Q  +SS+P           S TP  +GGGH GVAAV                           +GR  PVELA PL R       A        RS  P   F          G    R +RG  S                    G  GH   D+FAS  G+S  S+LFR LAGLDDP +EAP+VIVSR+   RSTRNLGG    T XXXXXXXXXX       GS + L  AFGRASSV G
Sbjct:  220 QTGVDSIYTLLTNVELSFEEVSSCSLVSSLEGVEAGIESAKLAVEELIEDDQLGSVSTNILELEEEFSNTQTTRRGVVYAAGALVLVMSVVYVSVGYYALGKDDGRGKAGGARMRGPVLIGCLILPLTLLVILLCWFLFGVSTSVALLTSDFCVDPSGHATEAFSKPADQELVAYYTSCEGANTFSDQLVTAYLQGSAAQGLLDALDDDEFATECPDEVESKETLDENIVLILAQIDSLGYLVQCGSVNPYFVEGVEEALCTDAPDAIWFVICGFAVVSVGLFVVAVSFRLLLQQKEEGLYKVIFEDEIEASETSSSYSGRSDDSWSRAHDLKKGSLAY-----------------DGGGRVQKGQEGSSSTPSTLP-------SSTPQGFGGGHHGVAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXRGRSTPVELATPLSR-------AXXXXXXXXRSGVPVEDFRQGGGYQEAAGARTGRGQRGAGSXXXXXXXXXXXXXXXXXXXXG-GGHIPMDNFAS--GRSSHSKLFRALAGLDDPEDEAPAVIVSRYADQRSTRNLGGPAGATXXXXXXXXXXXASRGELSGSGQ-LRYAFGRASSVAG 792          
BLAST of mRNA_L-elsbetiae_contig7341.16213.1 vs. uniprot
Match: A0A6H5JJC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC9_9PHAE)

HSP 1 Score: 491 bits (1265), Expect = 4.530e-154
Identity = 322/600 (53.67%), Postives = 369/600 (61.50%), Query Frame = 0
Query:    9 QAGVGTIYDLLGNVQESFEAISSCPLVSSLEGVEGGIASARDAVEVVVDDDELGSVGRAILSVHEVFSETATTRRGVVYAAGILVLIMSVVYVGVGYYALRKDGGQGKDGGARMRGPVLIGCLILPLTLLVIMLCWFLFGLSTSVALLTSDFCVDPSEHTTEAFSSPEDQEIVAFYTKCEGPNVFSDQLTTAFIQGRAAQGVLDALDDDEFAEQCPDEAASKVALDGNIAAILTQIDSLGALVQCSSINPFFVDGVEQSICNNAPRDVWFVIIGFAVVSVGLFVVAVSFRLLLQQKEEGLYKVVFDDELSPSVASSSDFGGSDDSFSRAHGGYAGGXXXXXXXXXXXXXXXXXXXRSGGAQVQ--QSSTSSSPXXXXXXXXXXXSRTPPRYGGGHGVAAVEVGAWVRPPKKQTAPKGRPVELAAPLPRSPAAAAAAAGGHVGRSRSRNPFAAPDDS--PSED---GGVWMRA--------RRGEHSSAVSRARSAAIPRERSRRSNGRSGHHHP-DDFASMSGKSRPSRLFRTLAGLDDPSEEAPSVIVSRHVGPRSTRNLGGTGXXXXXXXXXXXXXXXXDGSRRHLTVAFGRASSVVG 592
            Q GV +IY LL NV+ SFE +SSC LVSSLEGVE GI SA+ AVE +++DD+LGSV   IL + E FS T TTRRGVVYAAG LVL+MSVVYV VG+YAL KD G+GKDGGARMRGPVLIGCLILPLTLLVI+LCWFLFG+STSVALLTSDFCVDPS H TEAFS   DQE+VA+YT CEG N FSDQL TA++QG AAQG+LDALDDDEFA +CPDE  SK  LD NI  IL QIDSLG LVQC S+NPFFV+GVE+++C +AP  +WFVI GFAVVSVGLFVVAVSFRLLLQQKEEGLYKV+F+DE++ S  SSS  G SDDS+SRA+    G                      GG +VQ  Q  +SS+P           S  P    G HGVAAV V +  +                                                S  P ED   GG +  A        +RG  S A+  AR                G H P D+FAS  GKS  S+LFR LAGLDDP +EAP+VIVSR+   RSTRNLGG                        L  AFGRAS+VVG
Sbjct:  721 QTGVDSIYTLLVNVESSFEEVSSCSLVSSLEGVEAGIESAKLAVEELIEDDQLGSVSTNILELEEEFSNTQTTRRGVVYAAGALVLVMSVVYVSVGFYALGKDDGRGKDGGARMRGPVLIGCLILPLTLLVILLCWFLFGVSTSVALLTSDFCVDPSGHATEAFSKAADQELVAYYTSCEGANTFSDQLVTAYLQGSAAQGLLDALDDDEFATECPDEVESKETLDENIVLILAQIDSLGYLVQCGSVNPFFVEGVEKALCTDAPDAIWFVICGFAVVSVGLFVVAVSFRLLLQQKEEGLYKVIFEDEIAASETSSSYSGRSDDSWSRANDLKKGSLAY-----------------DGGLRVQKRQEGSSSTPSTLP-------SSAP--QAGPHGVAAVTVSSASKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSGVPVEDFRRGGGYQEASGARTGREQRGAGSGAI--ARXXXXXXXXXXXXXXXXGGHIPMDNFAS--GKSSHSKLFRALAGLDDPEDEAPAVIVSRYANQRSTRNLGGPAGATAAGGGGVTASRGELSGSGQLCYAFGRASNVVG 1290          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7341.16213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR15_ECTSI1.270e-16556.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJC9_9PHAE4.530e-15453.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006990TweetyPFAMPF04906Tweetycoord: 132..293
e-value: 4.2E-14
score: 52.0
IPR006990TweetyPANTHERPTHR12424TWEETY-RELATEDcoord: 113..365
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 276..301
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 302..592
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 148..275
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 107..125
NoneNo IPR availableTMHMMTMhelixcoord: 276..298
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 126..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7341contigL-elsbetiae_contig7341:271..8589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7341.16213.1mRNA_L-elsbetiae_contig7341.16213.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7341 271..8589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7341.16213.1 ID=prot_L-elsbetiae_contig7341.16213.1|Name=mRNA_L-elsbetiae_contig7341.16213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=592bp
MKINRPLPQAGVGTIYDLLGNVQESFEAISSCPLVSSLEGVEGGIASARD
AVEVVVDDDELGSVGRAILSVHEVFSETATTRRGVVYAAGILVLIMSVVY
VGVGYYALRKDGGQGKDGGARMRGPVLIGCLILPLTLLVIMLCWFLFGLS
TSVALLTSDFCVDPSEHTTEAFSSPEDQEIVAFYTKCEGPNVFSDQLTTA
FIQGRAAQGVLDALDDDEFAEQCPDEAASKVALDGNIAAILTQIDSLGAL
VQCSSINPFFVDGVEQSICNNAPRDVWFVIIGFAVVSVGLFVVAVSFRLL
LQQKEEGLYKVVFDDELSPSVASSSDFGGSDDSFSRAHGGYAGGGGTAAS
GKSLHAGSSKHAGRSGGAQVQQSSTSSSPESAPLSSPSSSSRTPPRYGGG
HGVAAVEVGAWVRPPKKQTAPKGRPVELAAPLPRSPAAAAAAAGGHVGRS
RSRNPFAAPDDSPSEDGGVWMRARRGEHSSAVSRARSAAIPRERSRRSNG
RSGHHHPDDFASMSGKSRPSRLFRTLAGLDDPSEEAPSVIVSRHVGPRST
RNLGGTGESGRSGVSGGGTGGGGDGSRRHLTVAFGRASSVVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006990Tweety