prot_L-elsbetiae_contig7340.16212.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7340.16212.1
Unique Nameprot_L-elsbetiae_contig7340.16212.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length108
Homology
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BLAST of mRNA_L-elsbetiae_contig7340.16212.1 vs. uniprot
Match: D7G681_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G681_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 2.480e-22
Identity = 46/56 (82.14%), Postives = 51/56 (91.07%), Query Frame = 0 
Query:   46 RLMHYLGEKDSAAAMNIFCALVVVGGCFVMFAIRSKWFYLLKKQLIEFEERVNAQL 101
            RLMH++GE+D AAAMNIF ALVVVGG FVMFAIRSK FYLLKKQL++FEE VNAQL
Sbjct:    2 RLMHHVGERDGAAAMNIFFALVVVGGGFVMFAIRSKSFYLLKKQLVDFEESVNAQL 57
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7340.16212.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G681_ECTSI2.480e-2282.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32
NoneNo IPR availableTMHMMTMhelixcoord: 56..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7340contigL-elsbetiae_contig7340:653..976 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7340.16212.1mRNA_L-elsbetiae_contig7340.16212.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7340 270..1152 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7340.16212.1 ID=prot_L-elsbetiae_contig7340.16212.1|Name=mRNA_L-elsbetiae_contig7340.16212.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp
MGSIVHRHNWPVPGAQELIFDNGRAGIMGDIEFWFKITLVFYALERLMHY
LGEKDSAAAMNIFCALVVVGGCFVMFAIRSKWFYLLKKQLIEFEERVNAQ
LTLSTLT*
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