prot_L-elsbetiae_contig7305.16177.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7305.16177.1
Unique Nameprot_L-elsbetiae_contig7305.16177.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length42
Homology
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BLAST of mRNA_L-elsbetiae_contig7305.16177.1 vs. uniprot
Match: D7FMF6_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF6_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 8.160e-18
Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 0 
Query:    1 MNRCSCVLVVRQYGSDVTMELDPGESRPLHWADGSLEATLSV 42
            MN+C CVLVVRQYGS+VTMEL PGESRPLHWADGSLEATLSV
Sbjct:  914 MNKCDCVLVVRQYGSNVTMELGPGESRPLHWADGSLEATLSV 955
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BLAST of mRNA_L-elsbetiae_contig7305.16177.1 vs. uniprot
Match: A0A6H5KXT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT8_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 2.030e-6
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 0 
Query:   19 MELDPGESRPLHWADGSLEATLSV 42
            MEL PGESRPLHWADGSLEATLSV
Sbjct:    1 MELGPGESRPLHWADGSLEATLSV 24
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7305.16177.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMF6_ECTSI8.160e-1890.48SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KXT8_9PHAE2.030e-695.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7305contigL-elsbetiae_contig7305:2024..2149 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7305.16177.1mRNA_L-elsbetiae_contig7305.16177.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7305 2000..2149 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7305.16177.1 ID=prot_L-elsbetiae_contig7305.16177.1|Name=mRNA_L-elsbetiae_contig7305.16177.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=42bp
MNRCSCVLVVRQYGSDVTMELDPGESRPLHWADGSLEATLSV
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