prot_L-elsbetiae_contig7304.16173.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7304.16173.1
Unique Nameprot_L-elsbetiae_contig7304.16173.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length91
Homology
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BLAST of mRNA_L-elsbetiae_contig7304.16173.1 vs. uniprot
Match: D8LEH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH6_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 6.210e-20
Identity = 46/58 (79.31%), Postives = 47/58 (81.03%), Query Frame = 0 
Query:   33 ELRPFFRDSRLETTLALIRSGQAFCQERRIVADFVRRAKPTAAGSGKAEVQPTDDLLR 90
            E R FFRD RLE TLALIRSGQAFCQER IV DFVRRAKPT  G GKAE+QP DDL R
Sbjct:  268 ERRNFFRDPRLEATLALIRSGQAFCQERHIVVDFVRRAKPTTVGLGKAELQPMDDLTR 325
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BLAST of mRNA_L-elsbetiae_contig7304.16173.1 vs. uniprot
Match: A0A6H5JCY2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCY2_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.220e-11
Identity = 37/56 (66.07%), Postives = 38/56 (67.86%), Query Frame = 0 
Query:   35 RPFFRDSRLETTLALIRSGQAFCQERRIVADFVRRAKPTAAGSGKAEVQPTDDLLR 90
            R FFRD RLE TLA       FCQER IV DFVRRAKPT   SGKAE+QP DD  R
Sbjct:  559 RNFFRDPRLEATLA-------FCQERHIVVDFVRRAKPTTVASGKAELQPMDDHTR 607
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7304.16173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEH6_ECTSI6.210e-2079.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCY2_9PHAE1.220e-1166.07Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7304contigL-elsbetiae_contig7304:170..1123 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7304.16173.1mRNA_L-elsbetiae_contig7304.16173.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7304 132..1185 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7304.16173.1 ID=prot_L-elsbetiae_contig7304.16173.1|Name=mRNA_L-elsbetiae_contig7304.16173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=91bp
MAAPAGSSPLRRRHASRKAARARAPKGGKEDEELRPFFRDSRLETTLALI
RSGQAFCQERRIVADFVRRAKPTAAGSGKAEVQPTDDLLR*
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