prot_L-elsbetiae_contig7245.16109.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig7245.16109.1
Unique Nameprot_L-elsbetiae_contig7245.16109.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length182
Homology
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BLAST of mRNA_L-elsbetiae_contig7245.16109.1 vs. uniprot
Match: D7G3G4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3G4_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 3.800e-31
Identity = 85/185 (45.95%), Postives = 103/185 (55.68%), Query Frame = 0 
Query:    1 VDLVRLDRIDAKRFTLLMEGFASPSVTSKMRRRKLCYNGPRLPPRYTSSSRPGSIHYSGKGIQSLLKKVCCSSRAGDSFFLCFSSDRDPSAQVLTGRLVESS-----ETLARLAN----FLFGA-PLPLEAVIFREGGSEGAGRAAVPADGINGAGARVLTVSDWVQAYGECNESRLWAWMYGGD 175
            V  +RL R+DAK F  L  GF S   T  +  R   Y GPR P  +TS+        SG+GI SLL  V  + R GD F LCFS   D  AQ++TG LV +       T +R  +     L G+ P P  A+IF E   E AGR A   DGINGAGARVL+V DWV  YGEC+ES L AW+Y G+
Sbjct:   31 VKAIRLGRVDAKSFFWLTRGFTSTKATELLAERGGRYAGPR-PASHTSACTGSPFFSSGQGITSLLSSVSANGRVGDRFVLCFSDGVDACAQMITGCLVATDGSGDCSTGSRYHDDNTYHLGGSSPPPCSAIIFGES-CERAGRPAGERDGINGAGARVLSVLDWVSVYGECSESLLCAWVYRGE 213
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7245.16109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3G4_ECTSI3.800e-3145.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7245contigL-elsbetiae_contig7245:5149..6131 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7245.16109.1mRNA_L-elsbetiae_contig7245.16109.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig7245 5149..6131 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig7245.16109.1 ID=prot_L-elsbetiae_contig7245.16109.1|Name=mRNA_L-elsbetiae_contig7245.16109.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
VDLVRLDRIDAKRFTLLMEGFASPSVTSKMRRRKLCYNGPRLPPRYTSSS
RPGSIHYSGKGIQSLLKKVCCSSRAGDSFFLCFSSDRDPSAQVLTGRLVE
SSETLARLANFLFGAPLPLEAVIFREGGSEGAGRAAVPADGINGAGARVL
TVSDWVQAYGECNESRLWAWMYGGDDEEEGGD
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