prot_L-elsbetiae_contig720.16044.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig720.16044.1
Unique Nameprot_L-elsbetiae_contig720.16044.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length220
Homology
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BLAST of mRNA_L-elsbetiae_contig720.16044.1 vs. uniprot
Match: D7G6J0_ECTSI (CXXC-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J0_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 1.200e-34
Identity = 86/148 (58.11%), Postives = 97/148 (65.54%), Query Frame = 0 
Query:    3 GRLRGSQEATHVTTESAGMVLS-YRGGVGSGSD--------VRLSSRSRRSGLKDFLRMGYRCLALLEEIGARPLLSAAADVLSGEGTAAAAAAAEQEVSAGGERLVWCPDTGRLLVEQTARERLAAFDPFHEVPEIEMATSLEPLAE 141
            G  R + EA HV  ESAG+VLS   GGVG  S          R SSRSRRSGLKD L  GYRCLALLEE+GARPLLSAA +VL             QE   GG  LVWC ++GRLL+++  R+RL A DPFHEVPEIEM TSLEPLA+
Sbjct:  722 GLPRPNHEAAHVLAESAGIVLSAVGGGVGGASSSXXXXXXRARPSSRSRRSGLKDLLGKGYRCLALLEELGARPLLSAAGEVL-------------QEGRGGGGGLVWCKESGRLLLKKDVRKRLVAVDPFHEVPEIEMTTSLEPLAK 856
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BLAST of mRNA_L-elsbetiae_contig720.16044.1 vs. uniprot
Match: A0A6H5LAU8_9PHAE (CXXC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAU8_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 1.660e-32
Identity = 81/144 (56.25%), Postives = 94/144 (65.28%), Query Frame = 0 
Query:    6 RGSQEATHVTTESAGMVLSYRGG--------VGSGSDVRLSSRSRRSGLKDFLRMGYRCLALLEEIGARPLLSAAADVLSGEGTAAAAAAAEQEVSAGGERLVWCPDTGRLLVEQTARERLAAFDPFHEVPEIEMATSLEPLAE 141
            R + EA HV+ ESAG+VLS  GG               R SSRSRRSGLK+ L  GYRCLALLEE+GARPLLSAA +VL             QE   GG  LVWC ++GRL +++  R+RLAA DPFHEVPEIEM TSLEPLA+
Sbjct: 1073 RPNHEAAHVSAESAGIVLSAVGGGVXXXXXXXXXXXRARPSSRSRRSGLKNLLGKGYRCLALLEELGARPLLSAAGEVL-------------QEGRGGGGGLVWCKESGRLALKKDVRKRLAAVDPFHEVPEIEMTTSLEPLAK 1203
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig720.16044.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6J0_ECTSI1.200e-3458.11CXXC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LAU8_9PHAE1.660e-3256.25CXXC-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 136..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig720contigL-elsbetiae_contig720:16978..18852 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig720.16044.1mRNA_L-elsbetiae_contig720.16044.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig720 16978..18853 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig720.16044.1 ID=prot_L-elsbetiae_contig720.16044.1|Name=mRNA_L-elsbetiae_contig720.16044.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=220bp
GQGRLRGSQEATHVTTESAGMVLSYRGGVGSGSDVRLSSRSRRSGLKDFL
RMGYRCLALLEEIGARPLLSAAADVLSGEGTAAAAAAAEQEVSAGGERLV
WCPDTGRLLVEQTARERLAAFDPFHEVPEIEMATSLEPLAEEQEQVQERE
QEQEQEVVEEEEEGEGEGEADGSGGRDTPPAQSTSAARKEAATAASPAAA
AATASVGAVVPGALSADRDE
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