prot_L-elsbetiae_contig711.15921.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig711.15921.1
Unique Nameprot_L-elsbetiae_contig711.15921.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length257
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig711.15921.1 vs. uniprot
Match: D7FYW2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYW2_ECTSI)

HSP 1 Score: 367 bits (943), Expect = 2.630e-126
Identity = 192/257 (74.71%), Postives = 219/257 (85.21%), Query Frame = 0 
Query:    1 MKVSMVPTMAVALGLLCGVESFVAPLPVGQRNQCTSSFSAHMIRTGAARSSSSSR-LMMGGFGEPAKKKKPAGVGRGQEAYQRQIKSYNGLIGAGAEGTDIYVHRNGDDKFIFVGKAAWSSGITVEQALQFQRGLILGHVELLEPRWKADPAPMRIFTAPLNSEVEVARNVHDLVKVLGPGKGKDVKVDALTPQEVGLKPELYELNEEYFYVRKLDDGKSPAPPANAMIESMEDLVAKGIVPGKVAVDAAAPEAAAE 256
            MK+S VP+ A+ALGLLC V+SF APL  G + + TSS + HMI +G  RS++SSR +MMGGFG P KKKK  GVGRGQ+AYQRQ+KSY+GL  AGAEG D+YVHR GDDKFIF+GKAAWSSGITV+QALQFQRGLILGHVELLEP WK  PAPMRIFTAP+NSE+EVARN+HDLV+VLGPGKGKDVKVD LTPQEVGL+PELYEL E YFYVRKLDDGK PAPP+  MIE+M++LVAKG+VP K  VDAAAP  A E
Sbjct:    1 MKISAVPSAAIALGLLCDVDSF-APLTAGWQLRQTSS-AWHMIPSGRPRSATSSRVMMMGGFGGPEKKKKVVGVGRGQDAYQRQVKSYHGLTEAGAEGADVYVHREGDDKFIFMGKAAWSSGITVQQALQFQRGLILGHVELLEPMWKDKPAPMRIFTAPINSEIEVARNIHDLVRVLGPGKGKDVKVDKLTPQEVGLRPELYELGEPYFYVRKLDDGKCPAPPSEVMIETMDNLVAKGVVPAKETVDAAAPPPADE 255
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig711.15921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYW2_ECTSI2.630e-12674.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..256
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.712

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig711contigL-elsbetiae_contig711:17963..21704 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig711.15921.1mRNA_L-elsbetiae_contig711.15921.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig711 17948..22691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig711.15921.1 ID=prot_L-elsbetiae_contig711.15921.1|Name=mRNA_L-elsbetiae_contig711.15921.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=257bp
MKVSMVPTMAVALGLLCGVESFVAPLPVGQRNQCTSSFSAHMIRTGAARS
SSSSRLMMGGFGEPAKKKKPAGVGRGQEAYQRQIKSYNGLIGAGAEGTDI
YVHRNGDDKFIFVGKAAWSSGITVEQALQFQRGLILGHVELLEPRWKADP
APMRIFTAPLNSEVEVARNVHDLVKVLGPGKGKDVKVDALTPQEVGLKPE
LYELNEEYFYVRKLDDGKSPAPPANAMIESMEDLVAKGIVPGKVAVDAAA
PEAAAE*
back to top