prot_L-elsbetiae_contig696.15733.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig696.15733.1
Unique Nameprot_L-elsbetiae_contig696.15733.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length239
Homology
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BLAST of mRNA_L-elsbetiae_contig696.15733.1 vs. uniprot
Match: A0A6H5JJQ7_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJQ7_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 6.830e-8
Identity = 56/135 (41.48%), Postives = 67/135 (49.63%), Query Frame = 0 
Query:   37 RSPLSEVTEDRRHSVNNSTP-DFPPSPHAPPAXXXXXXXXXXXXXXXXXXXAAYEKGPRKPPRLSSDADEVESVRLLSPSTSPPK--TRNVAGS------PHPSRFPGRGRPASKIPSPMSFSEKLAAAESDSDA 162
            RSPL+EVTEDRRHSVN++ P     SP A  A                   AA  K   +   LSS+ D+  +   L P    P   T N AGS      P P  FPG GRPAS IPS  SFS+ LA AE+++ A
Sbjct:  964 RSPLTEVTEDRRHSVNSNPPLSRSGSPIAAAA-------------------AARRKEQERTHGLSSEGDKAVTAAWLLPLPLTPSSNTENDAGSSSPRSSPPPGSFPGLGRPASTIPSMASFSDALADAETENTA 1079
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig696.15733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJQ7_9PHAE6.830e-841.48CAP-Gly domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig696contigL-elsbetiae_contig696:7808..9074 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig696.15733.1mRNA_L-elsbetiae_contig696.15733.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig696 7806..9074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig696.15733.1 ID=prot_L-elsbetiae_contig696.15733.1|Name=mRNA_L-elsbetiae_contig696.15733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=239bp
DSNAGVEGCGDARPKAIEAISSSHEPSECRSPSSEPRSPLSEVTEDRRHS
VNNSTPDFPPSPHAPPASNSTTITTTAATTAAITTTAAYEKGPRKPPRLS
SDADEVESVRLLSPSTSPPKTRNVAGSPHPSRFPGRGRPASKIPSPMSFS
EKLAAAESDSDAAEIVLAAAAAVASSGPPAPAAPRDAVAESAAVAPAAAT
AAAWSEAAPAAVGAGGGAGVGTGGATRGEEAPADVGTKA
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