prot_L-elsbetiae_contig6947.15717.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6947.15717.1
Unique Nameprot_L-elsbetiae_contig6947.15717.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length195
Homology
BLAST of mRNA_L-elsbetiae_contig6947.15717.1 vs. uniprot
Match: D7FWV9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV9_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 7.760e-41
Identity = 106/203 (52.22%), Postives = 125/203 (61.58%), Query Frame = 0
Query:   13 AAEAGEAQAAGDWDPAS----GVGVESATGSGYPETKDNGTDAAGNLFGNDLASKSEQALTQEGAPSAVI-----------IGASGGAFATHVSGEYPSATATATVSKRRNSMAFEIARMERAGKTLPPANPQKARRVWELSRPRYVEASD-HAPTTVEGGGGRGG----AKRRLRVLPGVESREAVPYGVWGTSWAQMGDFG 195
            AA A    +A +W+PAS    G GV+SA GSGYPETKDNG DAA NLFGND+    E   T    P+ VI           +G  GG      +     A+ T+T++KRRNSMAFEIAR+ERAGK +  ANP+KA+R WELSRPR+VE S  H P    GG G        K R R+ PG E+R AVPYGVW TSWAQMGDFG
Sbjct:   18 AAAAAAEGSAENWEPASQAGIGGGVDSAGGSGYPETKDNGEDAAANLFGNDIPD--EDGGTGGDGPAIVIASIPPAAADGVVGRGGGLGTRGSAAGTAFASGTSTLTKRRNSMAFEIARVERAGKAVL-ANPEKAKRAWELSRPRFVEESSVHGPAM--GGSGXXXXXREGKTRARLPPGQENRNAVPYGVWSTSWAQMGDFG 215          
BLAST of mRNA_L-elsbetiae_contig6947.15717.1 vs. uniprot
Match: A0A6H5JJI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI5_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.540e-40
Identity = 101/189 (53.44%), Postives = 122/189 (64.55%), Query Frame = 0
Query:   24 DWDPAS----GVGVESATGSGYPETKDNGTDAAGNLFGNDLASKS------EQALTQEGAPSAV---IIGASGGAFATHVSGEYPSATATATVSKRRNSMAFEIARMERAGKTLPPANPQKARRVWELSRPRYVEA-SDHAPTTVEGGG---GRGGAKRRLRVLPGVESREAVPYGVWGTSWAQMGDFG 195
            +W+PAS    G G++SA GSGYPETKDNG DAA NLFGND+  +         A+     P A    ++G  GG      +     A+ T+T++KRRNSMAFEIAR+ERAGK    AN +KA+R WELSRPR+VE  S H P     GG   GR G KRR R+ PG E+R+AVPYGVW TSWAQMGDFG
Sbjct:   30 NWEPASQARIGGGIDSAGGSGYPETKDNGEDAAANLFGNDIPVEDGGTGGXXXAVVIASIPPAAADGVVGRGGGLGTRGSAAGTGFASGTSTLTKRRNSMAFEIARVERAGKAAL-ANLEKAKRAWELSRPRFVEERSVHGPAMGGSGGAXXGRAG-KRRARLPPGQENRDAVPYGVWSTSWAQMGDFG 216          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6947.15717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWV9_ECTSI7.760e-4152.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJI5_9PHAE1.540e-4053.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6947contigL-elsbetiae_contig6947:9282..9866 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6947.15717.1mRNA_L-elsbetiae_contig6947.15717.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6947 9066..9866 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6947.15717.1 ID=prot_L-elsbetiae_contig6947.15717.1|Name=mRNA_L-elsbetiae_contig6947.15717.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=195bp
MRNGPATVFDTPAAEAGEAQAAGDWDPASGVGVESATGSGYPETKDNGTD
AAGNLFGNDLASKSEQALTQEGAPSAVIIGASGGAFATHVSGEYPSATAT
ATVSKRRNSMAFEIARMERAGKTLPPANPQKARRVWELSRPRYVEASDHA
PTTVEGGGGRGGAKRRLRVLPGVESREAVPYGVWGTSWAQMGDFG
back to top