prot_L-elsbetiae_contig6756.15506.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig6756.15506.1
Unique Name	prot_L-elsbetiae_contig6756.15506.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	494

Homology

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BLAST of mRNA_L-elsbetiae_contig6756.15506.1 vs. uniprot
Match: A0A6H5KD78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD78_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 3.390e-45
Identity = 99/173 (57.23%), Postives = 117/173 (67.63%), Query Frame = 0

Query:    7 LARGFDESMGVVEFSTVALDGEILLEVEGIYTCIGLSLVETFFHDGVYQGPLVAPAAGRKDGGHNNFEEQNAAASLATLRAAWNGGAGAFCAQKYASDASRRSSFQGASASRSTAQAHRYFDEWGRRERLGDSAGRFCKPRTAPQQGERGWTWAGHSERLAREREGAKQSNKE 179
            + +   ESMGVVEF TVAL GEILLE EGIYTCIGLSL+ETF+HD       V P    KD          AAA LA LRAAW+ GAG  CA+KY+S+A+RR S Q  S S +TAQ  +YFDEW RRERL DS GR+C+P   P+ GE GWTWA HSER+ RER  A ++ +E
Sbjct:   90 IGKDMSESMGVVEFHTVALGGEILLEAEGIYTCIGLSLIETFYHDEQQLQAPVVPGRHNKD--EVRIPHTMAAAELAPLRAAWDDGAGTLCAEKYSSEATRRGSLQAMSPSSTTAQEQKYFDEWARRERLEDSVGRYCRPHRPPRWGEPGWTWADHSERVLRERAEATRTEEE 260

[Close]

BLAST of mRNA_L-elsbetiae_contig6756.15506.1 vs. uniprot
Match: D7G308_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G308_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 2.300e-39
Identity = 103/221 (46.61%), Postives = 127/221 (57.47%), Query Frame = 0

Query:   37 YTCIGLSLVETFFHDGVYQGPLVAPAAGRKDGGHNNFEEQNAAASLATLRAAWNGGAGAFCAQKYASDASRRSSFQGASASRSTAQAHRYFDEWGRRERLGDSAGRFCKPRTAPQQGERGWTWAGHSERLAREREGA---KQSNKEAREAPFXXXXXXXXXXXXXXXXXXXXXXGSANTLAAELLDIALTA-RGEPLSPAQREEVVAKAGRMGAALSKARG 253
            YTCIGLSL+ETF+HD       V P    KD          AAA LA LRAAW+ GAGA CA+KY+S+A+RR S Q  S S +TAQ  +YFDEW RRERL DSAGR+C+P   P+ GE GWTWA HSER+ RER  A   ++ NK  R+                         G+A  LAAE ++ AL    G+PL+  Q +E    AGR+  +L KARG
Sbjct:  152 YTCIGLSLIETFYHDEQQLQAPVVPGRHNKD--EARLPHTMAAAELAPLRAAWDDGAGALCAEKYSSEATRRGSLQAVSTSSTTAQDQKYFDEWARRERLEDSAGRYCRPHRPPRWGEPGWTWADHSERVLRERAEATRKEEENKARRQEAADGHAKMFYEAAVEAAKKNGVSPGTAKILAAEAVEKALEGTNGQPLTLVQGKEAAMAAGRVAISLLKARG 370

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig6756.15506.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig6756.15506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KD78_9PHAE	3.390e-45	57.23	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G308_ECTSI	2.300e-39	46.61	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 163..183

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig6756	contig	L-elsbetiae_contig6756:1530..6846 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig6756.15506.1	mRNA_L-elsbetiae_contig6756.15506.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig6756 1530..6846 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig6756.15506.1 ID=prot_L-elsbetiae_contig6756.15506.1|Name=mRNA_L-elsbetiae_contig6756.15506.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=494bp
MRGEGVLARGFDESMGVVEFSTVALDGEILLEVEGIYTCIGLSLVETFFH
DGVYQGPLVAPAAGRKDGGHNNFEEQNAAASLATLRAAWNGGAGAFCAQK
YASDASRRSSFQGASASRSTAQAHRYFDEWGRRERLGDSAGRFCKPRTAP
QQGERGWTWAGHSERLAREREGAKQSNKEAREAPFKEARETLFKAAVEAA
MAGGMSAGSANTLAAELLDIALTARGEPLSPAQREEVVAKAGRMGAALSK
ARGQAPEQPPQTRDEELDAARHRPVSNINADGSAGAGDEVGNNEFAQRRL
RWRLSAPVQAALALAAAAAPMAADNDVPVQGRGRHDGGGGGSVRSRSRPP
LSPPHRPVGGRSRRALLPPPPPPPDRKEQEAAGGSRVFPDGNGSGPSRRS
LLALSATATEVVGPVAFLPKGSFGHSRKTQLLEGGEAAAKEGALAGAAGS
VGTAGASNVPLAQPLASAGANCSKEDGEDGSAERRLRVDQDDPT