prot_L-elsbetiae_contig6629.15355.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6629.15355.1
Unique Nameprot_L-elsbetiae_contig6629.15355.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length886
Homology
BLAST of mRNA_L-elsbetiae_contig6629.15355.1 vs. uniprot
Match: A0A6H5KWW9_9PHAE (Cnd1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWW9_9PHAE)

HSP 1 Score: 374 bits (960), Expect = 4.340e-116
Identity = 250/418 (59.81%), Postives = 276/418 (66.03%), Query Frame = 0
Query:  308 MLSCYTPFLLAIIKRRVADAXXXXXXXXXXXXXXXXXXXXXXXXX---------DAGAAANGNSDGLYAGAG-DRHSGPRSSGPATVEAGGKTSASLVGRGKRWPGDGDDAVPXXXXXXXXXSRCPRELCAEALWALSEYAVLSPGLAAAEVLPLAEGLASDTGEHAQVRRAAVGVLTRRELATDEIAAHACCNLLEDADPRLRREVLARLGRLMKESRIKTAHLARFALLLVDGCEEVRKTAQAVFFDHLQPRPDTVARCLFETYFTLDAEEPVKRRVLERLIAVAHKAAPEQGLQSLGGALVRKATETGDSQAAFFLSLVPPTVNSLEAAEVALRRGHLAQAPAETISLVATHFSRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKTTAQQALEMAARIGSLA 715
            MLSCYTPFLLAI++RRVAD                  XXXXXXXX          AG AA+G+ D    G+G D H   R       + GGK  A+     ++  G G  A           S CPR LC EAL ALSEYAVLS GLAAAEVLPLAEGLASDT EH QVR AAVGVLTRRELATDEIAAHAC +LLED +P +RREVL RLG+LMKESRIKT HL+RFALLLVD  E VR+ AQ VF DHLQPRPDTV RCLFET+FTLDAEE VKR+VL+RL+AVA +AAP QGL+SLGGALVRKA ETGDS+AAFFLSLVPPTVNS EAAEVALRRG LAQ+P  TI LVATHFSR A+                                     G   +  QALEMAA+IGSLA
Sbjct:    1 MLSCYTPFLLAIVRRRVADTAAARNVTAEKGAATKAEXXXXXXXXXXXXXXXXASAGGAADGDCDEARVGSGGDAHDETRLH--VVQQDGGKVEATDF---RKDGGQGRGATTAASVSLPASS-CPRALCTEALRALSEYAVLSAGLAAAEVLPLAEGLASDTLEHPQVRNAAVGVLTRRELATDEIAAHAC-SLLEDENPCVRREVLVRLGQLMKESRIKTGHLSRFALLLVDVSEGVRQAAQKVFIDHLQPRPDTVCRCLFETFFTLDAEEAVKRKVLQRLVAVAREAAPGQGLESLGGALVRKAAETGDSEAAFFLSLVPPTVNSFEAAEVALRRGQLAQSPHATIFLVATHFSRGAQRGAGSSLAITASVAGRGG-------------------GAPLSKAQALEMAAQIGSLA 392          
BLAST of mRNA_L-elsbetiae_contig6629.15355.1 vs. uniprot
Match: D8LKW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW2_ECTSI)

HSP 1 Score: 375 bits (963), Expect = 8.740e-109
Identity = 332/734 (45.23%), Postives = 368/734 (50.14%), Query Frame = 0
Query:    4 QVLCEVLAGVDGGVIASLLRDALEAYAAGDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLLRVLAESQHLFWRRLERRMGELQR-----EGGXXXDHCRRGGGEAPVVSVSV--------------SASEAAVSELSELLHVFRLLASRSLVSPEKSAALEALVFPAALSRRRLIRPAVGLALALDEPHRVLLSSLAVLQDAAFARPSTNVGRACDYVRLVGVLARENASFVAAHVRERYAGGAGPRGGEGED----EDDYMAGASNREAMEREIRRLQEASVTSDGMLSCYTPFLLAIIKRRVADAXXXXXXXXXXXXXXXXXXXXXXXXXDAGAAANGNSDGLYAGAGDRHSGPRSSGPATVEAGGKTSASLVGRGKRWPGDGDDAVPXXXXXXXXXSRCPRELCAEALWALSEYAVLSPGLAAAEVLPLAEGLASDTGEHAQVRRAAVGVLTRRELATDEIAAHACCNLLEDADPRLRREVLARLGRLMKESRIKTAHLARFALLLVDGCEEVRKTAQAVFFDHLQPRPDTVARCLFETYFTLDAEEPVKRRVLERLIAVAHKAAPEQGLQSLGGALVRKATETGDSQAAFFLSLVPPTVNSLEAAEVALRRGHLAQAPAETISLVATHFSRAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKTTAQQALEMAARIGSL 714
            +VLCEVLAGVD G IASLL DALEAYAA D                                                                   Q  LR LA SQ LFWRRLE+RM +++R     E G       RG      V VSV              SA+   +SELSELL +F+LLA+RSL+SPE  AALEALVFPAALSRRR                                        ACDYVRL+GVLARENASF+AAH+RE+Y+     R GE E     EDDYMAG SNREAM         A+   +G                       XXXXXXXXXXXXXXXXXXXX  D G A  G+        GD     +       + GGK  A++     R     D             S CPR LC EALWALSEYAVLS GLAAAEVLPLAE LASDT EH QVR AAVGVLTRRELATDEIAAHAC +LLED +P LRREVL RLG+L+KES                                         RCLFETYFTLDAEE VKR+VL+RL+AVA +AAP QGL+SLG ALVRK  E GDS+AAFFLSLVPPTVNS EAAEVA RRG LAQ+P  TISLVA HFSR A+                                     G   +  QALEMAARIGSL
Sbjct:  668 EVLCEVLAGVDSGAIASLLCDALEAYAAEDEIAPRDRDGAAASAPVLLRTLALLAEATGHAKNGVDERNGARQPGGSSNRERLAGRSGQHGAGDEEEQ--LRTLAGSQGLFWRRLEQRMEDIERDKRGEETGGRGVEGDRGQLRRRGVGVSVEQYHGGXXXXXXXRSAASDTISELSELLRMFQLLATRSLLSPENGAALEALVFPAALSRRR----------------------------------------ACDYVRLIGVLARENASFIAAHIREQYSARCLSRPGEEESAENGEDDYMAGVSNREAM-------GAATTAEEG----------------------EXXXXXXXXXXXXXXXXXXXXDGDCGGARVGSR-------GDAQDEMQYR--MAQQDGGKVEATVF----REDVGQDRGATAAAGVSLPASSCPRALCTEALWALSEYAVLSAGLAAAEVLPLAERLASDTLEHPQVRNAAVGVLTRRELATDEIAAHAC-SLLEDENPCLRREVLVRLGQLIKES-----------------------------------------RCLFETYFTLDAEEAVKRKVLQRLVAVAREAAPGQGLESLGSALVRKVAEAGDSEAAFFLSLVPPTVNSFEAAEVAHRRGQLAQSPHGTISLVAAHFSRGAQRGAGSSLATTASIAGRGG-------------------GAPLSKAQALEMAARIGSL 1256          
BLAST of mRNA_L-elsbetiae_contig6629.15355.1 vs. uniprot
Match: A0A6H5L3C3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C3_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 7.950e-25
Identity = 112/287 (39.02%), Postives = 130/287 (45.30%), Query Frame = 0
Query:    4 QVLCEVLAGVDGGVIASLLRDALEAYAAGDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLLRVLAESQHLFWRRLERRM---------------------GELQREG-GXXXDHCRRGGGEAPVVSVSV----SASEAAVSELSELLHVFRLLASRSLVSPEKSAALEALVFPAALSRRRLIRPAVGLALALDEPHRVLLSSLAVLQDAAFARPSTNVGRACDYVRLVGVLARENASFVAAHVRERY 264
            +VL EVLAGVD G IASLL DALEAYAA D                                                                   +  LR LA SQ LFWRRLE+RM                     G+L+R G G   +    GGG             SA+  AVSELSELL +F+LLA+ SL+S + SAALEALVFPAALSRRRLI                +  S+ +    AF        RACDYVRL+GVLARENASF+AAHVRE+Y
Sbjct:  554 EVLGEVLAGVDSGAIASLLCDALEAYAAED----------------------------------------------EIAPRDRDGETRKYSNYNSDEEEQLRTLAGSQGLFWRRLEQRMEDIERDERREESGWQGAQGDRGQLRRRGLGLSIEQYHGGGGXXXXXXXXXHGHRSAAPDAVSELSELLRIFQLLATYSLLSAKNSAALEALVFPAALSRRRLI----------------VSRSIDIHNSFAFLVLVWG-SRACDYVRLIGVLARENASFIAAHVREQY 777          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6629.15355.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KWW9_9PHAE4.340e-11659.81Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LKW2_ECTSI8.740e-10945.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3C3_9PHAE7.950e-2539.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 860..885
NoneNo IPR availablePANTHERPTHR23261GROUNDHOG-RELATEDcoord: 650..865
NoneNo IPR availablePANTHERPTHR23261:SF22GROUND-LIKE (GRD RELATED)coord: 650..865
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 447..577

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6629contigL-elsbetiae_contig6629:139..10593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6629.15355.1mRNA_L-elsbetiae_contig6629.15355.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6629 139..10593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6629.15355.1 ID=prot_L-elsbetiae_contig6629.15355.1|Name=mRNA_L-elsbetiae_contig6629.15355.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=886bp
MAWQVLCEVLAGVDGGVIASLLRDALEAYAAGDGDDDDDRRLNSDDAAAA
ASSAPPVLLRTLALLAEAGGGGGGGSDHHRAGTTTTAAAPSSSSSSSAEK
QRLLRVLAESQHLFWRRLERRMGELQREGGGGGDHCRRGGGEAPVVSVSV
SASEAAVSELSELLHVFRLLASRSLVSPEKSAALEALVFPAALSRRRLIR
PAVGLALALDEPHRVLLSSLAVLQDAAFARPSTNVGRACDYVRLVGVLAR
ENASFVAAHVRERYAGGAGPRGGEGEDEDDYMAGASNREAMEREIRRLQE
ASVTSDGMLSCYTPFLLAIIKRRVADAAAAAAEAAREPPPAAAEEGGVLL
AADAGAAANGNSDGLYAGAGDRHSGPRSSGPATVEAGGKTSASLVGRGKR
WPGDGDDAVPPPPPPPPSSSRCPRELCAEALWALSEYAVLSPGLAAAEVL
PLAEGLASDTGEHAQVRRAAVGVLTRRELATDEIAAHACCNLLEDADPRL
RREVLARLGRLMKESRIKTAHLARFALLLVDGCEEVRKTAQAVFFDHLQP
RPDTVARCLFETYFTLDAEEPVKRRVLERLIAVAHKAAPEQGLQSLGGAL
VRKATETGDSQAAFFLSLVPPTVNSLEAAEVALRRGHLAQAPAETISLVA
THFSRAARRGGGGGGGGGGGGGPPLSSSSSSSSSATAAAAVAVFTGNKTT
AQQALEMAARIGSLARRASSRRAARRPPPPPASERGGNSARSRPPRRSRE
FATQSEDDKTPRSPGPADESSRGERASSGGEGQRPRVREGARRKSGGGGG
GGSSSSSSRASKKRRRARDGGGRSRGGGGGGGGGGGGGSGNGVCSRAATG
KAKGKAKSTLDSMSVEEEEEEQEEEEEEEEEEWEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold