prot_L-elsbetiae_contig6621.15346.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6621.15346.1
Unique Nameprot_L-elsbetiae_contig6621.15346.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length121
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig6621.15346.1 vs. uniprot
Match: D8LT04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT04_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 3.240e-27
Identity = 83/120 (69.17%), Postives = 96/120 (80.00%), Query Frame = 0 
Query:    1 MEEERARQPAPXXXXXXXXXXXXXXXXXXXXXXXXGVASVPSSGVTMGAARPSHAKKMSSAEQAQAMIEHLEGRVESLEQDKLTGARSVDDVEEEVRDLRKQQKELRRKHPGRRRFLGLF 120
            +E+E+ARQPAP        XXXXXXXXXXXXXXXX          T+GAAR S AKKMS+AEQA+AMI+HL+  VE+LE+DKLTG RS+DDVEE VR+LR+QQKELRRKHPGRRRFLGLF
Sbjct:  256 LEQEQARQPAPLATVAGSAXXXXXXXXXXXXXXXXXXXXXXXXVGTVGAARGSSAKKMSNAEQARAMIQHLDEMVEALERDKLTGVRSIDDVEEAVRELRRQQKELRRKHPGRRRFLGLF 375
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6621.15346.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT04_ECTSI3.240e-2769.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availableCOILSCoilCoilcoord: 61..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6621contigL-elsbetiae_contig6621:7329..9436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6621.15346.1mRNA_L-elsbetiae_contig6621.15346.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6621 6949..9624 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6621.15346.1 ID=prot_L-elsbetiae_contig6621.15346.1|Name=mRNA_L-elsbetiae_contig6621.15346.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp
MEEERARQPAPPPLAAAAAALPSAAARGGGSSSAGGVASVPSSGVTMGAA
RPSHAKKMSSAEQAQAMIEHLEGRVESLEQDKLTGARSVDDVEEEVRDLR
KQQKELRRKHPGRRRFLGLF*
back to top