prot_L-elsbetiae_contig6611.15336.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6611.15336.1
Unique Nameprot_L-elsbetiae_contig6611.15336.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length649
Homology
BLAST of mRNA_L-elsbetiae_contig6611.15336.1 vs. uniprot
Match: A0A6H5KX96_9PHAE (Pyr_redox_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX96_9PHAE)

HSP 1 Score: 491 bits (1263), Expect = 3.510e-159
Identity = 371/637 (58.24%), Postives = 398/637 (62.48%), Query Frame = 0
Query:   36 EEVVGFGRCLLALGSMPRPPPPGFIEPAVRGRVALLGAGAGGPAGAGADREGLRKEVATGGSVTIVGSSWQALELACYLQQEGRGATADAVDGVSTGP--SGTCRMVFPDYAPLDHVLPRYLSVALLRRLNRKHIKTVGHSSLRWVGLANQATFTPXXXXXXXXXXXXXXXXXXXSPSSLPGHGLSGETPAGAAXXXXXXXXXXXXXXXSAHQRGQRGRXXXXXXXXXXXXXXXXQRLQVMTAHSFDHLDTATHSTDRVVLAGVDVAPLEVTLDLSGXXXXXX---------ALEVDRRRGAVVVNGELAASSRVWVAGDAACFPSRAHGGRRAVARSADHAHHSGRVAGENMAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXARRYRHTPAFVGEAPLAGVRLAMVGECDAAMTTHGFWWTTLKTNLFSGRSTSARGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTARXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------GVTL------VKGAMLWGFPGEATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAAGISARALDLLRTIMERSAGMEADLSDERVMQAWVQGLSDAARVVAQETGVGHLQPMRR 648
            +EVV FGRCL+ALGS PRPPPPGFIEPA R  V LLG+  G      A RE L++EVA G +VTIVGSSWQALELAC++Q+   GA              +GTCRMVF DYAPLDH+LPRYLSVALLRRLNRKHIKTVGHSSLRWVG ANQ  FTP                        P   + GE PA                  +      +G    XXXXXXXXX    +RLQVMTAHSFDHLDTATHSTD VVLAGVDVAPL+VTLDL G               ALEVDRRRGAVVVN ELAASSRVWVAGDAACFPS+AHGGRR V RSADHA HSGR+AGENMA A+                            RRY HTPAFVGEAPLAGVR+AM+GECDA+M THGFWWT   T L S ++T A   XXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXX                      GV        VKGAMLWGFPGEATAA                                         +AAAGISARALDLLRTIMERS+ MEADLSDERVMQAW+QGLSDAARVVAQETGVGHL PMRR
Sbjct:  257 QEVVAFGRCLVALGSRPRPPPPGFIEPAAREHVTLLGSREG------AGREELKREVAAGRAVTIVGSSWQALELACWIQEGRSGAXXXXXXXXXXXXXXAGTCRMVFSDYAPLDHILPRYLSVALLRRLNRKHIKTVGHSSLRWVGSANQRAFTPPLPPPSELDSGTLAMDRG------PADEVDGEVPAAGPGPVVLPRTLSTTGASTHEVSAAKGEGSSXXXXXXXXX----RRLQVMTAHSFDHLDTATHSTDTVVLAGVDVAPLDVTLDLHGTHRGGSGDRFGRKAAALEVDRRRGAVVVNAELAASSRVWVAGDAACFPSQAHGGRRLVIRSADHALHSGRLAGENMAVASGAARDGVGGNEG---------------GRRYHHTPAFVGEAPLAGVRIAMLGECDASMPTHGFWWTNSATGL-SRKTTVAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGVTLVSRSTARKEFTPVFGTGVVFYCRGSEVKGAMLWGFPGEATAAAAAMGGPAAAPGVFVEGGVREGGGSPTPAA-----------NAAAGISARALDLLRTIMERSSNMEADLSDERVMQAWLQGLSDAARVVAQETGVGHLAPMRR 850          
BLAST of mRNA_L-elsbetiae_contig6611.15336.1 vs. uniprot
Match: A0A4D9CU82_9STRA (Pyr_redox_2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU82_9STRA)

HSP 1 Score: 147 bits (372), Expect = 1.480e-33
Identity = 127/406 (31.28%), Postives = 165/406 (40.64%), Query Frame = 0
Query:   41 FGRCLLALGSMPRPPPPGFIEPAVRGRVALLGAGAGGPAGAGADREGLRKEVATGGSVTIVGSSWQALELACYLQQEGRGATADAVDGVSTGPSGTCRMVFPDYAPLDHVLPRYLSVALLRRLNRKHIKTVGHSSLRWVGLANQATFTPXXXXXXXXXXXXXXXXXXXSPSSLPGHGLSGETPAGAAXXXXXXXXXXXXXXXSAHQRGQRGRXXXXXXXXXXXXXXXXQRLQVMTAHSFDHLDTATHSTDRVVLAGVDVAPLEVTLDLSGXXXXXXALEVDRRRGAVVVNGELAASSRVWVAGDAACFPSRAHGGRRAVARSADHAHHSGRVAGENMAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXARRYRHTPAFVGEAPLAGVRLAMVGECDAAMTTHGFWW 446
            F +CLLA+G  P   PP ++E  + GRV         P     DR  L + VA G  VT+VGS+W ++ELA +L   GR            G S    +VFP+  PL   LPRYLS  L+RRL R+ ++ + H+ ++++G A                           P   P                            +A+ R                       ++V     F  LD+    TD VV+ G        T D  G       LE D + GA+VV+ EL ASS V+VAGDAA FP    G +R   RSADHA+HSG VAG NM                                 RY+H P F G  P  GVR A VG+CD +  THGFWW
Sbjct:  121 FEKCLLAVGEGPVRVPPRYVERDIAGRVT--------PLHRTEDRRVLGRSVAQGHHVTVVGSNWASVELASFLSDVGRRH--------GWGRSSVT-LVFPESTPLAKELPRYLSGLLMRRLERRGVEVIPHTCVKYIGRAMAYEVQALRPSQPWSPPFEPEEDAGEGPRRTP----------------------------TANSR----------PTEEHEPMASFDPIRVYLTSKFASLDSTALLTDHVVVGGSSAQGRLPTFDFDGHP-----LEADAKTGAIVVSHELQASSSVFVAGDAAHFPCTDLG-KRVNVRSADHAYHSGWVAGMNMTGRGV----------------------------RYQHLPLFFGAIPRLGVRAAWVGQCDGSAETHGFWW 437          
BLAST of mRNA_L-elsbetiae_contig6611.15336.1 vs. uniprot
Match: I2CPB6_NANGC (Apoptosis-inducing mitochondrion-associated 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPB6_NANGC)

HSP 1 Score: 95.9 bits (237), Expect = 2.320e-17
Identity = 91/309 (29.45%), Postives = 124/309 (40.13%), Query Frame = 0
Query:   41 FGRCLLALGSMPRPPPPGFIEPAVRGRVALLGAGAGGPAGAGADREGLRKEVATGGSVTIVGSSWQALELACYLQQEGRGATADAVDGVSTGPSGTCRMVFPDYAPLDHVLPRYLSVALLRRLNRKHIKTVGHSSLRWVGLANQATFTPXXXXXXXXXXXXXXXXXXXSPSSLPGHGLSGETPAGAAXXXXXXXXXXXXXXXSAHQRGQRGRXXXXXXXXXXXXXXXXQRLQVMTAHSFDHLDTATHSTDRVVLAGVDVAPLEVTLDLSGXXXXXXALEVDRRRGAVVVNGELAASSRVWVAGDAACFP 349
            F +CLLA+G  P   PP ++E  + GRV         P     DR  L + VA G  VT+VGS+W ++ELA +L   GR            G S    +VFP+  PL   LPRYLS  L+RRL R+ ++ + H+S++++G A                           P   P                            +A+ R                       ++V     F  LD+    TD VV+ G        T D  G       LE D + GA+VV+ EL ASS V+VAGDAA FP
Sbjct:  177 FEKCLLAVGEGPVRVPPRYVERDIAGRVT--------PLHRAEDRRVLGRSVAQGHHVTVVGSNWASVELASFLSDVGRRH--------GWGRSSVT-LVFPESTPLAKELPRYLSGLLMRRLERRGVEVIPHTSVKYIGRAMAYEVQALRPSQPWSPPFDPEEDTGEGPRRKP----------------------------TANNR----------PTEEQEPMASFDPIRVYLTSKFASLDSTALLTDHVVVGGSSSQGRLPTFDFEGHP-----LEADAKTGAIVVSHELQASSSVFVAGDAAHFP 425          
BLAST of mRNA_L-elsbetiae_contig6611.15336.1 vs. uniprot
Match: A0A7S3Y243_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y243_HETAK)

HSP 1 Score: 77.4 bits (189), Expect = 3.260e-11
Identity = 115/411 (27.98%), Postives = 160/411 (38.93%), Query Frame = 0
Query:   39 VGFGRCLLALGSMPRPPPPGFIEPAVRGRVALLGAGAGGPAGAGADREGLRKEVATGGSVTIVGSSWQALELACYLQQEGRGATADAVDGVSTGPSGTCRMVFPDYAPLDHVLPRYLSVALLRRLNRKHIKTVGHSSLRWVGLANQATFTPXXXXXXXXXXXXXXXXXXXSPSSLPGHGLSGETPAGAAXXXXXXXXXXXXXXXSAHQRGQRGRXXXXXXXXXXXXXXXXQRLQVMTAHSFDHLDTATHSTDRVVLAGVDVAPLEVTLDLSGXXXXXXALEVDRRRGAVVVNGELAASSRVWVAGDAACFPSRA---HGGRRAVARSADHAHHSGRVAGENMAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXARRYRHTPAFVGEAPLAGVRLAMVGECDAAMTTHGFWW 446
            V F + L+A G      PPGF       +V+L     G P        G    VA+GG VT+VG  W A  LA  L +  R            G      ++ P  +PL   LP +L+ AL RRL  + +  + ++ +R+V    Q         XXXXXXXXXXXXXXX                   XX                 +   G                 + L+V    ++D L+T T STD ++++ +D  P  V L  S        +E D    A+ VN EL ASS V+ AG++A  P      +G  R +    +HA+ +G +AG NMA                                  +  P F G     G R+  +G CDA + THGFWW
Sbjct:   29 VHFEKALVAAGGARPALPPGFAAAGAEAKVSL-----GAPQDGNLGVPGAL--VASGGHVTVVGGDWSAFYLAAQLNECAR----------RKGYKYAVTLLHPGASPLAAALPAHLASALARRLRARGMGALPYTLVRYVDKDTQLIEIKNLEEXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXSHDCEEEQTSAVRDDESKTDGGLTPHDDTEASSAMFRTEETLKVYICRTYDTLETGTFSTDHLIISSLD--PEAVML--SHGIKYSEGIEYDYGFKALKVNAELMASSSVYAAGESALLPQNLIFINGVHRGI----EHAYRTGTIAGRNMAGRNEVL----------------------------QDVPKFEGSLDSFGARVVALGNCDARLETHGFWW 382          
BLAST of mRNA_L-elsbetiae_contig6611.15336.1 vs. uniprot
Match: A0A835YV76_9STRA (Pyr_redox_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV76_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 2.960e-8
Identity = 49/150 (32.67%), Postives = 68/150 (45.33%), Query Frame = 0
Query:   36 EEVVGFGRCLLALGSMPRPPPPGFIEPAVRGRVALLGAGAGGPAGAGADR-EGLRKEVATGGSVTIVGSSWQALELACYLQQEGRGATADAVDGVSTGPSGTCRMVFPDYAPLDHVLPRYLSVALLRRLNRKHIKTVGHSSLRWVGLANQ 184
            ++V+GF RCL+A G+ P P P G+++PA  G V  L          G++  E     V  GGSV I+GS W+ALELAC+L+Q                                      LS AL++RL R  I    HS+LR+V    +
Sbjct:  152 QQVIGFERCLVATGAPPEPLPDGYVDPAAAGSVLPLH---------GSEACEAAMWRVRKGGSVVILGSGWEALELACHLRQ--------------------------------------LSTALVKRLRRLGINVTSHSALRYVSAGRE 254          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6611.15336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KX96_9PHAE3.510e-15958.24Pyr_redox_2 domain-containing protein n=2 Tax=Ecto... [more]
A0A4D9CU82_9STRA1.480e-3331.28Pyr_redox_2 domain-containing protein n=3 Tax=Mono... [more]
I2CPB6_NANGC2.320e-1729.45Apoptosis-inducing mitochondrion-associated 1 (Fra... [more]
A0A7S3Y243_HETAK3.260e-1127.98Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YV76_9STRA2.960e-832.67Pyr_redox_2 domain-containing protein n=1 Tax=Trib... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 263..308
e-value: 1.6E-13
score: 52.6
coord: 50..182
e-value: 1.8E-9
score: 39.3
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 309..378
e-value: 1.6E-13
score: 52.6
coord: 34..49
e-value: 1.8E-9
score: 39.3
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 8..382
NoneNo IPR availablePANTHERPTHR43557FAMILY NOT NAMEDcoord: 38..172
coord: 315..381
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..648
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..31
score: 8.191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6611contigL-elsbetiae_contig6611:2871..9158 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6611.15336.1mRNA_L-elsbetiae_contig6611.15336.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6611 669..9510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6611.15336.1 ID=prot_L-elsbetiae_contig6611.15336.1|Name=mRNA_L-elsbetiae_contig6611.15336.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=649bp
MPLPRSGAAAAAAAAAAAAAAAAAAEPAAPAAAREEEVVGFGRCLLALGS
MPRPPPPGFIEPAVRGRVALLGAGAGGPAGAGADREGLRKEVATGGSVTI
VGSSWQALELACYLQQEGRGATADAVDGVSTGPSGTCRMVFPDYAPLDHV
LPRYLSVALLRRLNRKHIKTVGHSSLRWVGLANQATFTPPPPPPPPPAPP
EVLPPPPPSPSSLPGHGLSGETPAGAAAAAAAAAAAGVDGGGSAHQRGQR
GRQRGQQRGPPRRRRRRRQRLQVMTAHSFDHLDTATHSTDRVVLAGVDVA
PLEVTLDLSGGGGGGGALEVDRRRGAVVVNGELAASSRVWVAGDAACFPS
RAHGGRRAVARSADHAHHSGRVAGENMAAAAAAGGGRGGAGAGGSAGRRV
RGGEGGEGARRYRHTPAFVGEAPLAGVRLAMVGECDAAMTTHGFWWTTLK
TNLFSGRSTSARGGGSSSGSSSSSSSSSSSSSNGSATAAARRGTARARHP
SPSEDGEGEGDEEDGGGGGGGGSGGGVTLVKGAMLWGFPGEATAAAAAAA
AAAAAKSGAPQAATAAATEGAEKEEPGSAAAAAAAADAAAGISARALDLL
RTIMERSAGMEADLSDERVMQAWVQGLSDAARVVAQETGVGHLQPMRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR006311TAT_signal