prot_L-elsbetiae_contig6610.15335.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6610.15335.1
Unique Nameprot_L-elsbetiae_contig6610.15335.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length53
Homology
BLAST of mRNA_L-elsbetiae_contig6610.15335.1 vs. uniprot
Match: A0A6H5KVY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY1_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 5.170e-23
Identity = 46/53 (86.79%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 ALASVGEWEALRKFGSERKSPIGYKPFALACMRTKQTGLYGADAERYITSYID 53
            ALASVGEWEALRKFG+ERKSPIGYKPFALACMR KQTGL G D ERYIT YI+
Sbjct:  739 ALASVGEWEALRKFGAERKSPIGYKPFALACMRKKQTGLLGDDTERYITGYIE 791          
BLAST of mRNA_L-elsbetiae_contig6610.15335.1 vs. uniprot
Match: D7FS70_ECTSI (Vacuolar protein sorting vps16 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS70_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 3.250e-22
Identity = 45/53 (84.91%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 ALASVGEWEALRKFGSERKSPIGYKPFALACMRTKQTGLYGADAERYITSYID 53
            ALASVGEWEALRKFG+ERKSPIGYKPFALACMR K TGL G D ERYIT YI+
Sbjct:  474 ALASVGEWEALRKFGAERKSPIGYKPFALACMRKKPTGLLGDDTERYITGYIE 526          
BLAST of mRNA_L-elsbetiae_contig6610.15335.1 vs. uniprot
Match: W7U1V8_9STRA (Vacuolar protein sorting-associated protein 16 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1V8_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.790e-6
Identity = 22/36 (61.11%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 ALASVGEWEALRKFGSERKSPIGYKPFALACMRTKQ 36
            ALA+ G++E L+ F SE+KSP+GYKPFA AC++ KQ
Sbjct:  936 ALAASGQFENLKAFASEKKSPVGYKPFAQACIKHKQ 971          
BLAST of mRNA_L-elsbetiae_contig6610.15335.1 vs. uniprot
Match: A0A836CCV0_9STRA (Vps16, N-terminal region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV0_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 4.580e-6
Identity = 27/48 (56.25%), Postives = 32/48 (66.67%), Query Frame = 0
Query:    1 ALASVGEWEALRKFGSERKSPIGYKPFALACMRTKQTGLYGADAERYI 48
            ALAS G+W ALR   +ER+SPIGY PFA A +   Q G   A+AE YI
Sbjct: 1165 ALASSGQWAALRLLAAERRSPIGYAPFARAAL---QHGQPTAEAEHYI 1209          
BLAST of mRNA_L-elsbetiae_contig6610.15335.1 vs. uniprot
Match: A0A7S2CBJ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CBJ2_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 6.720e-6
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    1 ALASVGEWEALRKFGSERKSPIGYKPFALACMRTK 35
            ALA   +WE L+KFG E+KSPIGY PFA AC+  +
Sbjct:   86 ALAKSQQWEELKKFGGEKKSPIGYGPFAEACIEQR 120          
BLAST of mRNA_L-elsbetiae_contig6610.15335.1 vs. uniprot
Match: A0A812UTB3_SYMMI (VCL1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UTB3_SYMMI)

HSP 1 Score: 49.3 bits (116), Expect = 2.170e-5
Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 0
Query:    2 LASVGEWEALRKFGSERKSPIGYKPFALACMR 33
             +  G+WE L K  +E+KSPIGYKPFALAC +
Sbjct:  385 FSKTGQWELLSKLATEKKSPIGYKPFALACKK 416          
BLAST of mRNA_L-elsbetiae_contig6610.15335.1 vs. uniprot
Match: A0A7S4MSF4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MSF4_9EUKA)

HSP 1 Score: 48.5 bits (114), Expect = 4.110e-5
Identity = 24/53 (45.28%), Postives = 31/53 (58.49%), Query Frame = 0
Query:    1 ALASVGEWEALRKFGSERKSPIGYKPFALACMRTKQTGLYGADAERYITSYID 53
            ALASV +WEAL  F  E+KSP+GY PFA  C+   +      +A +YI    D
Sbjct:  728 ALASVPKWEALFNFSKEKKSPVGYAPFAEVCLEKDEI----EEAIKYIPRITD 776          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6610.15335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KVY1_9PHAE5.170e-2386.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS70_ECTSI3.250e-2284.91Vacuolar protein sorting vps16 n=1 Tax=Ectocarpus ... [more]
W7U1V8_9STRA1.790e-661.11Vacuolar protein sorting-associated protein 16 n=2... [more]
A0A836CCV0_9STRA4.580e-656.25Vps16, N-terminal region-domain-containing protein... [more]
A0A7S2CBJ2_9STRA6.720e-660.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A812UTB3_SYMMI2.170e-559.38VCL1 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A7S4MSF4_9EUKA4.110e-545.28Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006925Vps16, C-terminalPFAMPF04840Vps16_Ccoord: 1..48
e-value: 1.4E-8
score: 34.2
IPR038132Vps16, C-terminal domain superfamilyGENE3D1.10.150.780coord: 1..53
e-value: 2.3E-11
score: 45.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6610contigL-elsbetiae_contig6610:10499..10657 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6610.15335.1mRNA_L-elsbetiae_contig6610.15335.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6610 10499..10657 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6610.15335.1 ID=prot_L-elsbetiae_contig6610.15335.1|Name=mRNA_L-elsbetiae_contig6610.15335.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=53bp
ALASVGEWEALRKFGSERKSPIGYKPFALACMRTKQTGLYGADAERYITS
YID
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006925Vps16_C
IPR038132Vps16_C_sf