prot_L-elsbetiae_contig66.15313.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig66.15313.1
Unique Nameprot_L-elsbetiae_contig66.15313.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length153
Homology
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BLAST of mRNA_L-elsbetiae_contig66.15313.1 vs. uniprot
Match: D8LGD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD3_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 9.010e-46
Identity = 101/152 (66.45%), Postives = 114/152 (75.00%), Query Frame = 0 
Query:    1 RGELQSRRSDSAPSLLPPIEGRLTLGTPPSPCTLRAVLSTSRSVAVEVPLGFGLVPEAGRAPNGD--ERFQALDPKSARRDLRAMLRARAQWQRQRMAEMAVPGAQQQRQG---GGSGLDAVTERFLRETRALDRDSEHLDDRLRGRWQRKK 147
            RGE QSRRSDSAPSLLPPIEG LT GTPPSP +L+ VLSTS SVAV VP GFGL   AG A  G+  +  +    KS  R+LRAMLRARA+WQ QRMAEMA PG+ +QRQ    GGSGLDA+ ERFLRET  LDRDS+ LD RLRGR + K+
Sbjct: 2254 RGEAQSRRSDSAPSLLPPIEGWLTEGTPPSPNSLKTVLSTSTSVAVGVPSGFGLASVAGVASKGEGGKIVRVRSSKSTSRELRAMLRARARWQSQRMAEMATPGSTEQRQQQGWGGSGLDALAERFLRETDTLDRDSKDLDTRLRGRQKNKR 2405
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BLAST of mRNA_L-elsbetiae_contig66.15313.1 vs. uniprot
Match: A0A6H5KU38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU38_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 1.670e-45
Identity = 99/146 (67.81%), Postives = 111/146 (76.03%), Query Frame = 0 
Query:    1 RGELQSRRSDSAPSLLPPIEGRLTLGTPPSPCTLRAVLSTSRSVAVEVPLGFGLVPEAGRAPN--GDERFQALDPKSARRDLRAMLRARAQWQRQRMAEMAVPGAQQQRQGG--GSGLDAVTERFLRETRALDRDSEHLDDRLRGR 142
            RGE QS+RSDSAPSLLPPIEG LT GTPPSP +L+ VLSTS SVAV VP GFGL   AG A    G    +    KS RR+LRAMLRARA+WQ QRMAEMA PG +Q++Q G  GSGLDA+ ERFLRET  LDRDS+HL+ RLRGR
Sbjct: 2202 RGEAQSQRSDSAPSLLPPIEGWLTEGTPPSPSSLKTVLSTSTSVAVGVPSGFGLASVAGVASKREGGNIVRVRGSKSTRRELRAMLRARARWQSQRMAEMATPGTEQRQQDGLGGSGLDALAERFLRETDTLDRDSKHLNIRLRGR 2347
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig66.15313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGD3_ECTSI9.010e-4666.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KU38_9PHAE1.670e-4567.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig66contigL-elsbetiae_contig66:35181..36915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig66.15313.1mRNA_L-elsbetiae_contig66.15313.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig66 35180..36915 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig66.15313.1 ID=prot_L-elsbetiae_contig66.15313.1|Name=mRNA_L-elsbetiae_contig66.15313.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp
RGELQSRRSDSAPSLLPPIEGRLTLGTPPSPCTLRAVLSTSRSVAVEVPL
GFGLVPEAGRAPNGDERFQALDPKSARRDLRAMLRARAQWQRQRMAEMAV
PGAQQQRQGGGSGLDAVTERFLRETRALDRDSEHLDDRLRGRWQRKKKRR
HGG
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