prot_L-elsbetiae_contig6599.15308.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6599.15308.1
Unique Nameprot_L-elsbetiae_contig6599.15308.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length53
Homology
BLAST of mRNA_L-elsbetiae_contig6599.15308.1 vs. uniprot
Match: D8LCP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP8_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 3.850e-16
Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    2 GIVTDPEPTEDEALPRGVSMTWGEACDIETFLLEITTHHANGNISLVKSVPC 53
            G+V DPEP   EA PRGVSMTWGE CD+ETF L+++ H   GN S VKSVPC
Sbjct:  221 GVVIDPEPDAGEAFPRGVSMTWGEVCDVETFSLKVSKHTVEGNTSAVKSVPC 272          
BLAST of mRNA_L-elsbetiae_contig6599.15308.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 5.220e-10
Identity = 27/53 (50.94%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    1 MGIVTDPEPTEDEALPRGVSMTWGEACDIETFLLEITTHHANGNISLVKSVPC 53
            +G V DPEP+ + ++PR VSMTW + CDIETFLL++ + +++G+ S+  SVPC
Sbjct:  225 LGEVVDPEPSTN-SIPRTVSMTWTDPCDIETFLLKLVSRNSDGSTSIATSVPC 276          
BLAST of mRNA_L-elsbetiae_contig6599.15308.1 vs. uniprot
Match: A0A6H5JG69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG69_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 8.820e-7
Identity = 22/29 (75.86%), Postives = 23/29 (79.31%), Query Frame = 0
Query:    2 GIVTDPEPTEDEALPRGVSMTWGEACDIE 30
            G+V DP P  DEA PRGVSMTWGE CDIE
Sbjct:  251 GVVIDPAPDADEAFPRGVSMTWGEVCDIE 279          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6599.15308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LCP8_ECTSI3.850e-1665.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF50_9PHAE5.220e-1050.94LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
A0A6H5JG69_9PHAE8.820e-775.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6599contigL-elsbetiae_contig6599:4520..5343 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6599.15308.1mRNA_L-elsbetiae_contig6599.15308.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6599 4520..6115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6599.15308.1 ID=prot_L-elsbetiae_contig6599.15308.1|Name=mRNA_L-elsbetiae_contig6599.15308.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=53bp
MGIVTDPEPTEDEALPRGVSMTWGEACDIETFLLEITTHHANGNISLVKS
VPC
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