prot_L-elsbetiae_contig6593.15298.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6593.15298.1
Unique Nameprot_L-elsbetiae_contig6593.15298.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length732
Homology
BLAST of mRNA_L-elsbetiae_contig6593.15298.1 vs. uniprot
Match: A0A6H5KUY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY0_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 4.820e-35
Identity = 72/152 (47.37%), Postives = 96/152 (63.16%), Query Frame = 0
Query:   64 LHTMALNLKTNTAVEWVLDRMKNTQWSGVPNAAEAALFQQCAMFHAAMSVKESGEVYSEDQRNAAIAKRYETWTAMAFLKSLNEDCNFDHLPSWLSKDIMGRNTMGDKVLREAKTAGTKGKLYLLTEKAIWRA-FTQACRAMRHEWNPVYDS 214
            + T +L L+ N + +WV++RMK T W   PN   A+LFQ    F+A MSVKESG+ YSE  RNA   K Y+++   AFL+ L E  +F   P+WL+KDIMGRN+MG K+L EA   GT+GKLY  TE ++WR  F     A+R +WN    S
Sbjct:    1 MSTASLMLEKNASSDWVINRMKGTNWGDKPNVGHASLFQFLPGFYAGMSVKESGKCYSESDRNAEAVKVYKSFAVPAFLRWLVEKYDFTTTPAWLTKDIMGRNSMGPKILLEAANKGTQGKLYDETEASLWRTRFGDVLLALRSDWNQTKTS 152          
BLAST of mRNA_L-elsbetiae_contig6593.15298.1 vs. uniprot
Match: A0A6H5LQJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQJ9_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 3.950e-26
Identity = 58/138 (42.03%), Postives = 85/138 (61.59%), Query Frame = 0
Query:   64 LHTMALNLKTNTAVEWVLDRMKNTQWSGVPNAAEAALFQQCAMFHAAMSVKESGEVYSEDQRNAAIAKRYETWTAMAFLKSLNEDCNFDHLPSWLSKDIMGRNTMGDKVLREAKTAGTKGKLYLLTEKAIWRAFTQAC 201
            + T +L L+ N + +WV++RMK T W   PN   A+LFQ    F+ AMSVKESG+ YSE +RNA   K Y+++   AFL+ L E+ +F + P+WL+KDIMG N++G KVLR    +  +G+      +    AF + C
Sbjct:    1 MSTASLMLEKNASSDWVINRMKGTNWGDKPNVGHASLFQFLPGFYVAMSVKESGKCYSEPERNAGAVKVYKSFAVPAFLRWLVEEYDFTNTPAWLTKDIMGSNSIGPKVLRPGANSHIRGRSPPTENELQHVAFPRLC 138          
BLAST of mRNA_L-elsbetiae_contig6593.15298.1 vs. uniprot
Match: D7FPI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI6_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 1.180e-14
Identity = 55/173 (31.79%), Postives = 91/173 (52.60%), Query Frame = 0
Query:   68 ALNLKTNTAVEWVLDRMKNTQWSGVPNAAEAALFQQCAMFHAAMSVKESGEVYSEDQRNAAIAKRYETWTAMAFLKSLNEDCNFDHLPS--WLSKDIMGRNTM-GDKVLREAKTAGTKGKLYLLTEKAIWRAFTQACRAMRHEWNPVYDSLLDGGPGEKSRSGEQGSDVMEQL 237
            +L L+ N+  E V+  +++ + SG+ +A      Q   + +A ++VK +  + S   ++AA AK Y+    + F K L E+   D   S  WL+ ++MGR +M GD VL       T GK        +W+ F    RA++  +NPV+DS ++G PG++  SG Q  D +E L
Sbjct:   11 SLPLEFNSYAETVISMLRDRRSSGLTDAKLLKHLQNVCIVYACLTVKRNAGIVSTQAKHAAAAKGYKDIAVLGFFKWLKENLEADQYFSQPWLTFEVMGRTSMSGDAVLF------THGK-------KLWKRFDNIMRALKKFYNPVWDSFVEGQPGDQLPSGSQDEDAIEYL 170          
BLAST of mRNA_L-elsbetiae_contig6593.15298.1 vs. uniprot
Match: A0A6H5KB89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB89_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 8.410e-14
Identity = 63/200 (31.50%), Postives = 96/200 (48.00%), Query Frame = 0
Query:  301 PVNWVHKYSLIFAFLGRPAGDCDEYHYLALQAGSGPDVDEVERAGDGDGGAGEDVKPAAAGKGGLKSRGGVKSLKKEGGEGAGLPASRKQKREGKAAEEKEARRHKRQAADDERNDRILAAIEKPQETKVDHALIGYLNSFADQQTQAAHQQAQADIKEKREYELKTLRELVELERECGTPEELKVAQRALMKLLRETLP 500
            P N+VHKYSLIFA  GRPAG   EYH L+L++GSGPD +                           S   ++ LKK+G  GAG+PASR ++++         +R K      E N  +L  ++ P E++ D  +I ++        +   + A+  I+E R  E+ TL E + L +E G   ++K  +  L+ L    LP
Sbjct:    2 PANYVHKYSLIFALPGRPAGKQHEYHCLSLESGSGPDGEXXXXXXXX-----XXXXXXXXXXXXXXSPASIRDLKKQGATGAGIPASRTERKKDXXXXXXXVKREKAAQETKEFNAELLGLLKNPVESEADRVIIDFVREMKKTNRKKDIRLAKKSIQEDRTLEVTTLHEQIALYKEMGNEGQVKETREKLLALYATPLP 196          
BLAST of mRNA_L-elsbetiae_contig6593.15298.1 vs. uniprot
Match: A0A6H5KJ61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ61_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.440e-10
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 0
Query:   64 LHTMALNLKTNTAVEWVLDRMKNTQWSGVPNAAEAALFQQCAMFHAAMSVKESGEVYSEDQRNAAIAKRYETWTAMAFLKSL 145
            + T +L L    + +WV++RMK + W   PN   A+L Q    F+ AMSVKESG+ YSE  RNA   K Y+++   AFL+ L
Sbjct:    1 MSTASLMLDKEASSDWVINRMKGSNWGDKPNVGHASLSQFLPGFYVAMSVKESGKCYSEPDRNAEAVKVYKSFAVPAFLRWL 82          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6593.15298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KUY0_9PHAE4.820e-3547.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LQJ9_9PHAE3.950e-2642.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPI6_ECTSI1.180e-1431.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB89_9PHAE8.410e-1431.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJ61_9PHAE1.440e-1042.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 395..415

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6593contigL-elsbetiae_contig6593:2..3495 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6593.15298.1mRNA_L-elsbetiae_contig6593.15298.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6593 2..3497 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6593.15298.1 ID=prot_L-elsbetiae_contig6593.15298.1|Name=mRNA_L-elsbetiae_contig6593.15298.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=732bp
GRILWQRNLAAKLCFIRLRYPGSKIGATPSYGENEMWGCREKSMSPIPRG
QLACVPCGSPLTLLHTMALNLKTNTAVEWVLDRMKNTQWSGVPNAAEAAL
FQQCAMFHAAMSVKESGEVYSEDQRNAAIAKRYETWTAMAFLKSLNEDCN
FDHLPSWLSKDIMGRNTMGDKVLREAKTAGTKGKLYLLTEKAIWRAFTQA
CRAMRHEWNPVYDSLLDGGPGEKSRSGEQGSDVMEQLHEEMWKKTPQSQK
KVRKTGKKGSGEVGGAAGATAAATAVSGGEAGAGAIAGEGVTEIIVSVEQ
PVNWVHKYSLIFAFLGRPAGDCDEYHYLALQAGSGPDVDEVERAGDGDGG
AGEDVKPAAAGKGGLKSRGGVKSLKKEGGEGAGLPASRKQKREGKAAEEK
EARRHKRQAADDERNDRILAAIEKPQETKVDHALIGYLNSFADQQTQAAH
QQAQADIKEKREYELKTLRELVELERECGTPEELKVAQRALMKLLRETLP
THVAPVPSAIRTQGAGGSAAPTATPSSNGAGPPILDLTEGVAEGGEDYDL
LEAELSFEPEFGDDDAEMEAAAENGTPALTLAGAWAASTGKAIPQVGATI
LPVAPASMGMVPPVGQATLPVAPAVLPGAAGAAGAAAAAAVGRGVLNGTT
APSHGVLHGGVAAAAAGGGGTVHGTPAPSHGLFHGGVAVAPAGGGGTVHG
SPAPLQVVTLAGLPAEKDPAPAPSPAVLPGLP
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