prot_L-elsbetiae_contig6592.15297.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig6592.15297.1
Unique Nameprot_L-elsbetiae_contig6592.15297.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length78
Homology
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BLAST of mRNA_L-elsbetiae_contig6592.15297.1 vs. uniprot
Match: D7FN22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN22_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.440e-14
Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 0 
Query:   36 LGPRAVTREDLTRLDDEIANLSKTVEQVAMAHTRQVLRNVAD 77
            LGPRAVTREDLTRLD+EIANLSKTVEQ AMA TRQ+LRNVAD
Sbjct:  793 LGPRAVTREDLTRLDNEIANLSKTVEQAAMAQTRQILRNVAD 834
[Close]
BLAST of mRNA_L-elsbetiae_contig6592.15297.1 vs. uniprot
Match: A0A6H5L3T3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T3_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 1.440e-6
Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 0 
Query:   36 LGPRAVTREDLTRLDDEIANLSKTVEQV 63
            LGPRAVTREDLTRLD+EIANLSKTVEQ+
Sbjct:  738 LGPRAVTREDLTRLDNEIANLSKTVEQL 765
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig6592.15297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FN22_ECTSI1.440e-1490.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3T3_9PHAE1.440e-692.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig6592contigL-elsbetiae_contig6592:3313..8883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig6592.15297.1mRNA_L-elsbetiae_contig6592.15297.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig6592 3313..8973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig6592.15297.1 ID=prot_L-elsbetiae_contig6592.15297.1|Name=mRNA_L-elsbetiae_contig6592.15297.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=78bp
TNRAVVTGKTAGGGGGDGGGGSGASSSRAASSWARLGPRAVTREDLTRLD
DEIANLSKTVEQVAMAHTRQVLRNVAD*
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